Clupea harengus (Atlantic herring): 116220238
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Entry
116220238 CDS
T09045
Name
(RefSeq) sialidase-3-like
KO
K12357
sialidase-2/3/4 [EC:
3.2.1.18
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00511
Other glycan degradation
char00600
Sphingolipid metabolism
char01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
116220238
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
116220238
Enzymes [BR:
char01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.18 exo-alpha-sialidase
116220238
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Motif
Pfam:
BNR_2
BNR_3
BNR
Motif
Other DBs
NCBI-GeneID:
116220238
NCBI-ProteinID:
XP_031421452
UniProt:
A0A6P8FDX5
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Position
4:complement(25842149..25844007)
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AA seq
386 aa
AA seq
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MGCCATTCCATKSSSSETLDVADKSSCSETLVFADKNYHFRIPALLYVKEWKTFLAFAEK
RTSANDADAKNLVMSKGTGDSGSLKWSSTEDVKEAFKDGYRTMNPCPVFERNSKTLFLFF
ICIKGNTSEGQLKPGQTCLSYITSTDRGVTWSGLTDLTSSVKFTNYQTFAVGPGHGIQLR
SGPLLVPAYVKVYSGKSVETHAVVLRSEDLNTWKAGQPIAVESGECQLAEVSDGEGRRQV
YLNARSTGALVPRVEALSDDGGASFTLFPLKNRTLEETPNGCQGSVLGFPASELPAGGVG
SSETALLFSHPTGPDRLDLGVYMRKSLQEHDPWGKPHIIHKGESGYSDLTCCEEEGHFGC
LMECGHGRVSKCLQIAFKEFDLKEIV
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgggatgctgtgccactacatgctgtgccactaaatcctcctccagtgaaacacttgat
gttgctgataaatcctcctgcagtgaaacacttgtgttcgctgataaaaactatcacttc
agaattccagctcttctttacgttaaagaatggaagacattcctggcatttgcagagaag
cgcacctctgccaatgatgcagacgcaaagaatctggtgatgagtaaaggcacgggggac
agcggctcactgaagtggtcttccacagaggacgtgaaggaggcgttcaaagatggctac
cgcaccatgaacccctgtccagtctttgaaaggaactcaaaaacactgtttctgttcttc
atctgcatcaagggtaacacttcggaaggtcagctcaagccaggccagacttgtttaagc
tacatcaccagcacagaccgcggggtgacctggagtggtttaacagacttaacgagcagt
gtcaagtttaccaattaccaaacctttgctgtgggaccgggccacgggatccagctgaga
agcggcccactgctcgtgcctgcctatgtgaaggtgtactctggtaagagtgtggagacc
catgctgtggtgctgcgcagcgaggacctgaacacctggaaggcaggccagcccatcgcc
gtggagtccggtgagtgccagctggccgaggtgtctgacggggagggtaggaggcaggtg
tatctgaacgctcgcagcaccggagcactggtgccacgggtagaggcactgagtgacgac
ggcggggcaagttttacccttttccccctcaaaaaccgaacgctagaggagacgccaaac
ggctgccaggggagtgtgttggggttccctgccagtgagcttccagcaggaggagtggga
tcctcagagacggctctgctcttcagccacccgacaggcccggacaggctggacctcggg
gtctacatgagaaagtctctccaggaacacgacccctggggtaaaccccacatcatccac
aagggggaaagtggctactcagacctcacctgctgtgaggaggagggtcactttggttgt
ctgatggagtgtggccatgggagagtgagtaaatgtcttcagatcgccttcaaagagttc
gatctcaaggagatagtttaa
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