Clupea harengus (Atlantic herring): 116220350
Help
Entry
116220350 CDS
T09045
Name
(RefSeq) sialidase-3-like
KO
K12357
sialidase-2/3/4 [EC:
3.2.1.18
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char00511
Other glycan degradation
char00600
Sphingolipid metabolism
char01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
char00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
116220350
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
116220350
Enzymes [BR:
char01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.18 exo-alpha-sialidase
116220350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BNR_2
BNR_3
BNR
Motif
Other DBs
NCBI-GeneID:
116220350
NCBI-ProteinID:
XP_031422728
UniProt:
A0A6P8F2E5
LinkDB
All DBs
Position
4:complement(25877416..25880341)
Genome browser
AA seq
386 aa
AA seq
DB search
MGCTATKCCATTSPCGETLVFADKNYDFRIPALLYVKEWKTFLAFAEKRTSSNDADATKA
RGSLQWSPTEDLMKATIHGYRTMNPCPVFERISKRLFLFFICIKGQIPECKLKPGQTCLC
YITSTDHGVTWSDITDLTSSVNFTNYQTFAVGPGHGIQLNSGTLLVPAYVKVGSGKSVKP
HVVVLRSEDQHTWKASQPITVESLECQLAEVSDGEGRRQVYLNTRSTGAPVPRVEALSDD
GGASFPLFPLKNRTLKETPHGCQGSVLGFPASDIPAGGGGSSETALLFSHPTAPTKGKDW
DRLDLGVYLRKSLQDDDPWGKPHIIHKGASGYSDLTCCEEEGHFGCLMECSKVEMCKRLQ
IAFTEFDVKEILQIVNHSDVDRGEAV
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgggatgcactgccactaaatgctgtgccactacatccccctgcggtgaaacacttgtg
tttgctgataaaaactatgacttcagaattccagctcttctttacgttaaagaatggaag
acattcctggcgtttgcagagaagcgcacctcttccaacgatgcagacgcaacgaaggca
cgcggcagcctccagtggtctcccacagaggacttgatgaaggcaacaatacatggctac
cgcaccatgaacccctgtccagtctttgagaggatctcaaaaagactgtttctcttcttc
atctgcatcaagggtcaaattccagaatgtaagctcaagccaggccagacttgtttatgc
tacatcaccagcacagaccacggggtgacctggagcgatataacagacttaacgagcagt
gtcaactttaccaattaccaaacctttgctgtgggaccgggccacgggatccagctgaac
agcggcacactgctcgtgcctgcctatgtgaaggttggctctggtaagagtgtgaagccc
catgttgtggtgctgcgcagcgaggaccagcacacctggaaggcaagccagcccatcacc
gtggagtccctggagtgccagctggccgaggtgtctgacggggagggtaggaggcaggtg
tatctgaacactcgcagcaccggagcaccggtgccacgggtagaggcactgagtgacgac
ggcggggcaagtttcccccttttccccctcaaaaaccgaacgctaaaggagacgcctcac
ggctgccaggggagtgtgttggggttccctgccagtgacattccagcaggaggaggggga
tcctcagagacggctctgctcttcagccacccgaccgcaccgaccaaaggaaaggactgg
gacaggctggacctcggggtctacctgagaaagtctctccaggacgacgacccctggggt
aaaccccacatcatccacaagggggccagtggatactcagacctcacctgctgtgaggag
gagggtcactttggttgtctgatggagtgtagcaaggtggaaatgtgtaaacgtcttcag
atcgccttcacagagttcgatgtcaaggagatactgcaaatagtcaatcattcagatgta
gacagaggggaagctgtgtga
DBGET
integrated database retrieval system
