Clupea harengus (Atlantic herring): 116220428
Help
Entry
116220428 CDS
T09045
Name
(RefSeq) transcription factor HES-5-like
KO
K06055
hairy and enhancer of split 5
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
116220428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
116220428
Transcription factors [BR:
char03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Hairy, Hairy/E(SPL)
116220428
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HLH
Hairy_orange
bHLH_NPAS4
Motif
Other DBs
NCBI-GeneID:
116220428
NCBI-ProteinID:
XP_031422937
Ensembl:
ENSCHAG00000024819
UniProt:
A0A6P8FI98
LinkDB
All DBs
Position
5:4050731..4053176
Genome browser
AA seq
161 aa
AA seq
DB search
MAPTITSTADYSKEHLSLTHKQRKPAVEKMRRDRINNCIEELKALLGPQLLNQQPESKLE
KADILEMTVCLLRRKLQQRSLPSHDAVHQGFTMCAQEVVHFLSRKDVQTQSHRTVLNHFQ
TLKPLSDEDVQESALPQLSMLDQDKMRKERSPARSAPWRPW
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
atggctcctacaatcacttccacagcagattactcaaaggaacacctgagtctgacacac
aagcagagaaagccagctgtcgagaagatgcgcagagatcgcatcaacaactgcatcgag
gagctcaaggctctcctgggtccacagctcctcaaccagcagcccgaatccaagctggag
aaagccgacatcctggagatgacggtttgcctcctgagacgaaagcttcagcaaaggagt
ctaccctcccatgatgctgttcaccagggattcaccatgtgtgcccaggaggttgttcac
ttcctgtcaagaaaagacgttcagacacagtcccacagaacagtgctgaaccacttccag
accctgaagcccttatctgatgaggacgtgcaagagtcagccctccctcagttgagtatg
ttggaccaagacaaaatgagaaaagagagaagtccagccaggagcgccccctggaggccg
tggtag
DBGET
integrated database retrieval system