Clupea harengus (Atlantic herring): 116220477 Help Entry 116220477         CDS       T09045                                  Name (RefSeq) collagen alpha-1(VII) chain-like   KO K16628   collagen type VII alpha Organism char  Clupea harengus (Atlantic herring) Pathway char04382   Cornified envelope formation Brite KEGG Orthology (KO) [BR:char00001]  09150 Organismal Systems   09158 Development and regeneration    04382 Cornified envelope formation     116220477 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  fn3 VWA Collagen VWA_2 Pur_ac_phosph_N Ig_DSCAM-DSCAML_C DUF4992 VWA_3 fn3_2 DUF1194 Motif Other DBs NCBI-GeneID:  116220477 NCBI-ProteinID:  XP_042563668 UniProt:  A0A8M1KMQ9 LinkDB All DBs Position 5:21690064..21731923 Genome browser AA seq 1831 aa AA seqDB search MWGIISFAVLATLLPRSAAQGQCNSVREADVVFLVDGSSSIGRSNFQLVKGFMSGLVKPF ASAVGGSGVRFGVVQYSDSSRMEFPFGRYTNGTEVVAAVENIQYKNGGTRTGDGLKFIVD NFFSPPNIRDVPKIVIVITDGKSQDPVTDLVQRLRNLGVKIFALGIKSADQRELAQIASS PQNYFSMFISNFKGLSSVLPQVSPRVCATAGGTYSSDEALPGPSNLQFTGSTTDSLRFRW SPAGGQVTGYLIQYTPISGLGQPISTELRQVTVGADQQSYTVQTLRSGTDYLVSVIAQYP NSVGEAVSAKSSTKSSQGVSSLRVLRSGFFSISLAWDAPTNQPQGYRVTYGPRSQPASQL EQKLSPGVTTVTLDRLQADTEYIASVLPLFPGNTTTPTRISAKTLRLEAVRQLTVETISE RSVGVRWRAADGAKAYRLVWGPFTGRNVETQEVSTESYTLSSLQPDVEYIITVIALYDNN TEGPAATARFKTERFEQQVLRATPTGPSSIRLTWNLIRSARGYRIEYKRDGAAVERVTLP QGTITHELRELQPQTEYIITLYTLYEGREEATPVSTTPHAAKVQDLRVTNVNSRRIRIAW TKVSGVTGYRITWRQGNSGVQFRELSSDLSAFTIEGLQPDEYVLLSVSAVIDGTVGEAVT LNSRTHGYSISGLRIVDVTSRSIRVTWDTVSSATGYKISWRHNNGAESSRNVASGVTSHT IDGLEENASYRVAVSALIGSTEGTPATVLTRTVTGGVVGTVTELKVLAPQDEEVRVTWVG VQGATSYRVVWRKTEGGEEQSKLVGSGVTSVDLEQLERGAQYEVQVMALVQDQEGSPVSV RVTTPGIAVERVEGLQVLEARPGNLRLTWRAVTGATGYRVYWSTTGEAERSQSIRRDVTS YDLEGLRPGLSYNIRFAALFRDRESETVTVRATTTALRSVSNLRVIDITQNSMLLGWTPM PGATSYVLRWREERDTGEGQTQVMNGSANSFRVSGLRLGRRYVFSLQPSFQNQVGPVATV EERTVCVDGRLDVVFLVPASRDRSRLKEPVLSLLASAAGTLTTIGSRDSQMGVLVYSDVP RVHFLLNRHSNSQTLLQEILSTPFSAGPGNAISQALTYTQKFFLTLSAGRRRVPGVVVLI ADAKSTDDVIRAAAELRATGVTVLAVGIGRADSAELRRVVTDGSTQNLLSVSDVAQLYRY HPELADLLCGVARGTGTTGPDGDQCTVQCPNGEKGGPGQKGEAGRDGLVGRKGDPGRDGL PGREGPRGPEGQPGRTAGPSGGGEKGERGFPGLDGSPGVPGRPGTAGTLGIPGSQGVPGV RGDPGEPGASGPLGGKGEKGQKGESDGAAGAGLPGRKGEPGIPGLPGRPSTDGAKGVAGS PGLDGRPGIPGTPGVSSKGDKGDRGERGLPGFGSGVAVKGEPGTPGTPGLPGPIGPNALP GLRGSKGDKGESSEGQPGPPGSQGEPGDRGPRGPPGERGIKGDRGQGGQPGIQGDRGERG PAGPLAEKGESGKPGPSGPPGPRGLAGPSALPGEKGSKGESGEPGGGGSILPGRKGERGE TGLAGPDGPRGEKGERALKGDKGLPGVGLQGPAGTKGEQGDRGTAGLGGRPGVKGDRGEP GENGEAGRNGSPGPPGLRGKEGEKGDKGDEGTAGEPGLAGKAGERGVRGLPGPLGRVGEK GDIGDPGEHGRNGSPGSIGPRGIKGDQGIQGLPGPPGTAVEGDKQLKPERGEKGDAGDPG EHGGKGQRGEAGVQGPPGPQGTEGLRGLPGSRGETGLRGSAGEKGERGAAGLDGRNGLDG KPGTPGVVGLRVRKSVLLKLQFSHHLVWREK NT seq 5496 nt NT seq  +upstreamnt  +downstreamnt atgtggggtatcatttcctttgctgtgttggcgactcttctgcctagaagtgctgctcaa ggtcagtgtaacagtgtgagggaagctgatgttgtgtttttggtggatggatcatccagc atcggacgttccaacttccagttggtgaaaggcttcatgtcaggcctggtgaaacccttt gccagtgctgtgggggggtcgggtgtgcgctttggagtggtgcagtacagtgactcttca aggatggagttcccctttggaagatatacgaatggaacagaggttgtggctgctgtggaa aatatccagtataagaatgggggcactcgcactggggatgggctcaagttcatcgttgat aatttcttcagccctccgaacattcgagatgttccaaagattgtcatcgttattactgat gggaagtcacaggaccctgttacggatcttgttcagaggttacgcaatcttggggtcaag atctttgccttgggtataaaaagtgcggaccagagggagctggctcagatagcctcctcc ccacagaactacttctccatgttcatcagcaactttaagggcctcagctctgtgctgcca caggtttccccacgagtgtgtgctactgcagggggaacatattccagtgatgaggccctt ccgggtccatctaacctgcagtttacaggcagcaccactgactcactgcgcttccggtgg agcccagcaggaggccaagtcactggctacctgatccagtacacacctatctctggactg ggacagccaatcagcacagagctacgacaggtgacagttggagctgatcagcagagttac accgttcagaccctgcgttctggcactgactacctggtctcagtcattgcccagtaccca aacagcgtcggagaggctgtatctgctaaatctagcaccaagtcatctcagggtgtgtcg tcgctgcgtgtgttacgttccggtttcttctccatctccttggcctgggatgcccccacc aatcaaccacaaggctacagggtaacctatgggcccagaagtcagccagcctcacagctg gagcagaagctgtcccctggtgttaccacagtgacactggaccgtctgcaggcggatact gagtacatagctagcgttctccccctgtttcctggaaatacaacaacacccactaggata tctgctaaaaccttgcgtttagaggcagtgagacagctgactgttgaaacaatctcagag agaagcgttggtgttcgctggagagctgcagatggagccaaggcttaccggctcgtctgg ggacctttcacaggtcgtaatgtggagacgcaagaggtcagcacagagtcttacacactc tctagtcttcagcctgacgttgagtacatcatcactgtcatcgctctctatgacaacaac acagagggccctgcagccacagccaggttcaaaacagagcgttttgaacagcaggtgctc agagccacacccacaggcccctcctccatcagactgacctggaacctgatcagatctgcc agaggctaccgcatagagtacaagagagacggggccgctgttgaaagggtgacgttaccc cagggcaccatcactcatgagctgcgtgagctgcagccccagactgagtacatcatcacg ctctacacactgtatgagggccgagaggaggccacacctgtgtccaccacacctcacgcg gctaaggtccaagacctgcgggtgacaaacgtgaacagccgacgaatcaggattgcttgg acgaaggtttccggggtgactggctacagaatcacctggagacaaggcaacagtggtgtc cagttccgtgagctttcctcagacctctcagccttcaccattgaggggctgcagccagat gagtatgtgctgctgagtgtttccgcggtgattgacggaaccgtgggcgaggcggtgact ttgaacagccggacacacggctacagcatctctgggctccgcatcgtggacgtgacctcc aggagtatacgcgtcacctgggacaccgtgtcctcggcaacgggatacaaaatcagctgg cgtcataacaatggtgcggaatcctccaggaatgtggcatccggtgtgacctcacacact attgatgggctggaggagaatgcgtcctaccgcgtagctgtctcggctctcattggctca accgaggggactccagccacagtgctcaccaggacagtgactggcggggtcgttggcaca gtaacagagctaaaggtgctggcgccacaggacgaggaagtcagggtcacatgggtcgga gttcagggggcaacatcctaccgtgtcgtctggaggaaaactgaaggtggtgaggagcag agtaagctggtggggagtggtgtgacctcagtggacctggagcagctggagcgcggggcc cagtacgaggtgcaggtcatggcactggtgcaggaccaggagggctcaccagtctctgtc agggtcaccacacctggcatagcagtggagcgtgtggagggactgcaggtgttggaggcg agaccaggaaacctgcgtctgacctggagagcagtaacaggggctactggatacagggta tactggagtacaacaggagaggcagagagaagccagtctatccggagggatgtgacctca tacgacctggaaggacttcggcctggcctgagctacaacattcgattcgccgcacttttc cgagacagagagagcgagacagtcactgtcagggccactacaactgctcttagatcggtg tccaatttacgggtgatcgatattacccagaattcaatgcttctggggtggacgccaatg ccaggtgccacatcttatgttctgcgatggagagaggaaagagacacaggagaggggcag acgcaggtgatgaacgggtcagcaaactcgttccgtgtgtctggactgaggctgggcagg cgctatgtgttctccctacagccctccttccagaaccaggtcggacctgtggctactgta gaggagcgcacagtgtgtgtggacgggcgtctggatgtggtgttcctggtccccgcgtct cgagatcgctctcgtctgaaggagcctgtcctctctctgctcgccagcgcagcaggaaca ctcaccaccatcggctccagagattcccagatgggggtcttagtgtacagcgatgtgccc agagtgcacttcctactcaatcgccatagcaacagtcagactctactccaggagattctg tcgacccccttctcagctggccctgggaatgcaataagtcaggcactgacatatacacag aaattcttcctgactttgtcggccggcagaagacgtgtgccgggagtcgtggtactcatt gccgatgccaaatctactgatgatgtcatcagggcagcagctgaactcagggccacaggt gtgacagtgctggcagtagggattggtcgggctgactctgcggagctacggcgtgtggta actgacggcagcacccagaacctgctgtccgtgtctgacgtggcgcagctgtaccgctac caccctgaactggccgacctgctgtgcggcgtcgccagggggacgggaacaacgggtcct gatggagaccagtgcactgttcagtgccctaacggtgagaaaggaggacctggacaaaaa ggggaagcaggacgtgatgggcttgttggcagaaagggagatcctggacgtgatgggttg ccgggcagagagggccctcgagggccagaggggcaaccaggtcggactgcagggccttca gggggaggagagaaaggagaaagggggtttccagggttggatgggagtcctggagtcccc ggccgcccaggaactgccggcacccttggaataccgggatctcagggtgttcctggagtc agaggagatcctggggagccaggagcatctgggcctctaggtgggaagggagagaaagga caaaagggtgaatcagacggagcagctggagctggattaccagggaggaagggagagcca ggaatccctggactaccgggtcgcccaagtactgatggggcaaagggagttgctggatca cctggattggatggtcgccctgggatacctggcacccctggtgtctcctctaaaggtgat aagggagacaggggagagagggggctcccaggatttggcagtggtgtggcagttaaaggg gagcctggaacacccgggacaccagggcttccaggcccaataggtccaaatgcactgccg ggattgaggggatccaaaggcgacaagggtgagagctcagagggtcagccgggaccccca ggaagtcaaggagagcccggggaccgaggtccaagagggccccctggtgaaagaggaatt aagggtgatcggggccaaggaggtcaaccagggattcaaggagacaggggagagagagga ccagctgggcccttagcagagaagggggagtctggtaaacctggcccttcagggcctcct ggaccccgcggtttggcagggccaagtgcacttccaggagagaagggaagcaaaggcgaa tcgggagagcctggaggtggtggtagtatcctgccggggaggaaaggagagcggggggag acgggacttgctggtcctgatggtcccagaggagagaagggggagcgggcactgaagggc gataaaggcctccctggtgttggtctgcaaggccccgcaggaactaaaggagaacaaggg gatcgagggacagctggcctggggggcagacctggagtaaagggtgaccgcggtgaacca ggggagaatggggaggctggtagaaatgggtccccaggaccgccaggcctacgggggaaa gagggagagaagggagacaagggagatgaaggaactgcaggcgagccagggttggcaggc aaggctggggagcgtggtgtgcggggtttaccaggaccattaggacgagtgggggagaaa ggagacataggtgatcctggggagcatgggcgtaatggcagtcctgggtctattggacca cgggggattaagggagatcaggggattcaggggcttcctggtcctccgggaacagcggtt gaaggtgacaaacagctgaaaccggaaagaggcgaaaagggtgacgcaggagacccaggg gaacacgggggtaaaggtcagagaggagaggcaggtgtgcaggggcctccaggaccacag ggaactgaaggactgagaggacttccagggtccagaggtgaaacaggcctgaggggcagt gctggagaaaagggagagagaggagctgctggattggatggtcgtaatggtctggatggg aaacctggaacacctggagttgttggactgagagtaaggaaatctgtcctcctaaaactt cagtttagtcatcatttagtttggcgtgaaaaatga

DBGET integrated database retrieval system