Clupea harengus (Atlantic herring): 116220958
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Entry
116220958 CDS
T09045
Name
(RefSeq) neurofilament medium polypeptide-like
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
char04812
]
116220958
Cytoskeleton proteins [BR:
char04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
116220958
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Filament
DUF1664
Baculo_PEP_C
TFIIF_alpha
Motif
Other DBs
NCBI-GeneID:
116220958
NCBI-ProteinID:
XP_031425738
UniProt:
A0A6P8FB43
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Position
7:25578121..25581237
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AA seq
684 aa
AA seq
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MDVIGASSRRRVLETRGIRASPSASLRSHSWSQRAPGSTSMSYKRTTNVPASRAYTSASA
GVLASPGSLELSSALNADHARNNEKEQLQGLNDRFASYIDKVRYLEEQNKLLETEIQELR
QRKSTQSQYSDAFDQELSELRSTLEQLHREKAQIIVDADNIEEDIHRLKNRYEDEARLRE
KTEIAIRELNKQKENSVLIKSDLEKKVQSLLDEADFLRSNHEEEVSELLAQLQEAQVPVD
MREFSKTDITSALREIRAQLDGFSSQNLHQAEEVFQCRYAKLTDAADQNKDAIKSVRDEI
ADYRRQLQVKNVELEALRGTKDSLDRQLNDIEDRHNNDLGSYQEMIHQLDSELKGMKREM
SHHLREYQDLLNVKMALDAEIAAYRKLLEGEETRFFSGFVDSYPSPAFPYRQPMTSKAKK
EDKQADLNEDLAAVAEELQAEGGEEEEGDEEEQEAVEEEVAASKQPKVSATPPTEEEEEG
DEEETEGGEEGEEEEEVEGDKEEAEEEESEIEETELSSSKAHKTDTEQQEGEKKQEEEEV
EEEKADAEEEEETSKGSKDEEQDDKEQESGEKEKKSDSEGEEKKSDLEDAEQKKEEKEKE
EEKEEAAVTNGEQKSPTQTAGSPKEEVVLTQTVETITKGEKVAPKPAKSKAAVEVKEAKP
TPKEAAKTSAPASTAPASKEVKEK
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcataggggcttcatcccgcagaagagtgctcgagacacggggcatccgcgcc
tccccatctgccagcctcaggtcgcactcctggtctcagagagcccccggctccacgtcc
atgtcctacaaaagaaccaccaacgtgccagcaagcagggcatacacgagcgcgtccgca
ggagtgttagcctctccaggcagcctagaactctcatccgcgctcaatgccgaccacgcg
cgcaacaacgagaaggaacagcttcaagggctgaatgaccgattcgccagttatatcgat
aaagtccgttatctggaagaacagaataaactgctggagactgaaattcaagaactccgg
caaaggaagtccacgcagtcacaatatagtgatgcattcgaccaagagctgagcgaactt
cgttccacgctagagcagctgcacagagagaaggctcagatcattgttgatgcagataac
atcgaagaagacattcaccgtctgaaaaatcgctatgaggatgaagcacgccttagagaa
aaaacggagattgcaatcagggaactgaataagcaaaaagaaaactcggttctgattaaa
tcggacctggagaaaaaagttcagtctctcttggatgaagcagacttcctgcgcagtaac
cacgaagaggaggtcagcgaactccttgctcagctccaggaggcgcaggtgcctgtggat
atgagggagttcagtaaaacggacatcacctccgcgctccgggaaatccgcgcgcaactg
gacggcttctcctcacaaaacctgcatcaagctgaagaagtgttccagtgccgctatgcc
aaactaacggacgcagcagatcagaacaaggacgcgatcaaatctgttcgggatgagatc
gcagattatcgccggcagttgcaggtgaagaatgtcgaactggaggctctccgtggcacg
aaggactccctggacagacagctgaatgacattgaagaccggcataacaacgacctaggc
agctaccaggagatgatccatcagctggacagcgagctgaagggaatgaagagggagatg
tctcaccacctcagggaataccaggatctgctcaatgtcaagatggctctggatgctgag
atcgctgcttacaggaaacttctggagggtgaagagactcgttttttctcgggatttgtt
gattcgtacccaagtcccgccttcccataccgtcagccaatgacctccaaagcaaagaaa
gaggacaaacaggcagacctgaacgaggacctggccgccgtagcagaggagcttcaggca
gaggggggtgaggaagaggagggggatgaggaagagcaggaggctgtggaagaagaggtg
gctgcctccaagcagcctaaagtgagtgctacaccccctacagaagaggaggaggagggt
gatgaggaggagacagaaggaggagaggaaggggaggaggaagaagaagtagagggggat
aaggaggaggcagaggaggaagagtcagagattgaggaaacagaactgagcagttccaaa
gcccataagactgacactgaacaacaggaaggagagaagaagcaggaagaagaggaggta
gaggaagagaaggcagatgctgaggaagaagaagaaacaagcaaaggatctaaagatgag
gagcaggatgataaagaacaagagtcaggagagaaagagaaaaagagtgattcagaggga
gaggagaagaagagtgatttagaagacgctgagcagaagaaggaggagaaggagaaggag
gaggagaaggaggaggcagctgtcaccaacggagaacagaagagtcccacccagacagct
ggaagcccaaaggaggaggtggttctgacccaaaccgtagagaccatcaccaaaggagag
aaggtcgcccccaagcctgccaagagcaaggcagccgtggaggtcaaagaggcaaaaccc
acccccaaggaagcagcaaagacatctgccccagcctctactgccccagcctctaaagag
gtaaaagagaagtaa
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