Clupea harengus (Atlantic herring): 116220959
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Entry
116220959 CDS
T09045
Name
(RefSeq) neurofilament medium polypeptide-like
KO
K04573
neurofilament medium polypeptide (neurofilament 3)
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
char04812
]
116220959
Cytoskeleton proteins [BR:
char04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type IV
116220959
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Filament
DUF1664
Motif
Other DBs
NCBI-GeneID:
116220959
NCBI-ProteinID:
XP_031425739
UniProt:
A0A6P8FIJ6
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Position
7:25593437..25596754
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AA seq
733 aa
AA seq
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MDVIGASSRRRVLETRGIRASPSASLRSHSWSQRAPGSTSMSYKRTTNVPASRAYTSASA
AVLATPGSLELSSAANADHARNNEKEQLQGLNDRFASYIDKVRYLEEQNKLLETEIQELR
QRKFTQSQYSDAFDQELSELRSTLEQLHREKVQIIVDADNIEEDIHRLKNRYEDEARLRE
KTEIAIRELKKEKDDSVLIKSDLEKKVQSLLDEADFLRSNHAVEVSELLAQLQEAQVPVD
MREFSKTDITSALREIRAQLDGFSSQNLHQAEEVFQCRYAKLSDAADQNKDAIKSVRDEI
ADYRRQLQVKNVELEALHGTKDSLDRQLNDTEDRHSNDLGSYQEMIHQLDSELKGMKREM
SHHLREYQDLLNVKMALDAEIAAYRNLLEGEETRFRGFVDSYPSPAFPYRQPMTSKAKKE
DKQADLNEDLAAVTEELQAEGGEEEEGDEEEQEAVEEEVAASKQPKVSATPPTGEEEDGD
EEEAEEEESEIEETELTSSKAHKTETEQQEGEEKQEEEGEMKSDSEGEEKKSDTEKKEKK
SDTEKEEKKSDSEGEEKKSDTEKEEKKSDSEREEKKSDVEKEERKSDSEGEEKKRDTEKK
EKKSDSEGEEKKSDTEKEEKKSDSEREEKKSDVKKEEKKTDAEQKKEEKEKEEEAAVTNG
EQKSPTQTAGSPKEEVVLTQTVETITNGEKVASKPAKSKAAVEVKEAKPTPKEAAKTSAP
ASTAPASKEVKEK
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atggatgtcataggggcttcatcccgcagaagagtgctcgagacacggggcatccgcgcc
tccccatctgccagcctcaggtcgcactcctggtctcagagagcccccggctccacgtcc
atgtcctacaaaagaaccaccaacgtgccagcaagcagggcatacacgagcgcgtccgca
gcagtgttagccacgccaggcagcctagagctctcatccgcggccaatgccgaccatgcg
cgcaacaacgagaaggaacagcttcaagggctgaatgaccgattcgccagttatatcgat
aaagtccgttatctggaagagcagaataaactgctggagactgaaattcaagaactccgg
cagaggaagttcacgcagtcacaatatagtgatgcattcgaccaagagctgagcgaactc
cgttccacgctagagcagctgcacagagagaaggttcagatcattgttgatgcagataac
atcgaggaagacattcaccgtctgaaaaatcgctatgaggatgaagcacgccttagagaa
aaaacggagattgcaatccgggaactgaagaaggaaaaagacgactcggttctgattaaa
tcggacctggagaaaaaagttcagtctctcttggatgaagcagacttcctgcgcagtaac
cacgcagtggaggtcagcgaacttcttgctcagctccaggaggcgcaggtgcctgtggat
atgagggagttcagtaaaacggacatcacctccgcgctccgggaaatccgcgcgcaactg
gacggcttctcctcacaaaacctgcatcaagcggaggaggtgttccagtgccgctatgcc
aaactttcggacgcagcagatcagaacaaggacgcgatcaaatctgttcgggatgagatt
gcagattatcgccggcagttgcaggtgaagaatgtcgaactggaggctctccatggcacg
aaggactccctggacagacagctgaatgacactgaagaccggcatagcaacgacctaggc
agctaccaggagatgatccatcagctggacagcgagctgaagggaatgaagagggagatg
tctcaccacctcagggaataccaggatctgctcaatgtcaagatggctctggatgctgag
atcgctgcctacaggaatcttctggagggtgaagagactcgctttaggggttttgttgat
tcctacccaagtcccgccttcccataccgccagccaatgacctccaaagcaaagaaagag
gacaaacaggcagacctgaacgaggacctggccgccgtaacagaggagcttcaggcagag
gggggtgaggaagaggagggggatgaggaagagcaggaggctgtggaagaagaggtggct
gcctccaagcagcctaaagtgagtgctacaccccctacaggagaggaggaggatggtgat
gaggaggaggcagaggaggaagagtcagagattgaggaaacagaactgaccagttccaaa
gcccataagactgagactgaacaacaggaaggagaggagaagcaggaagaagagggggag
atgaagagtgattcagaaggagaggagaagaagagtgatacagagaaaaaggagaagaag
agtgatacagagaaagaggagaagaagagtgattcagaaggagaggagaagaagagtgat
acagagaaagaggagaagaagagtgattcagaaagagaggagaagaagagtgatgtagag
aaagaggaaaggaagagtgattcagaaggagaggaaaagaagagagatacagagaaaaag
gagaagaagagtgattcagaaggagaggagaagaagagtgatacagagaaagaggagaag
aagagtgattcagaaagagaggagaagaagagtgatgtaaagaaagaggagaagaagaca
gacgctgagcagaagaaggaggagaaggagaaggaggaggaggcagctgtcactaacgga
gaacagaagagtcccacccagacagctggaagcccaaaggaggaggtggttctgacccaa
accgtagagaccatcaccaacggagagaaggtcgcctccaagcctgccaagagcaaagca
gccgttgaggtcaaagaggcaaaacccacccccaaggaagcagccaagacatctgcccca
gcctctactgccccagcctctaaagaggtgaaagagaagtaa
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