Clupea harengus (Atlantic herring): 116221147
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Entry
116221147 CDS
T09045
Name
(RefSeq) putative claudin-24
KO
K06087
claudin
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03272
Virion - Hepatitis viruses
char04382
Cornified envelope formation
char04514
Cell adhesion molecule (CAM) interaction
char04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
116221147
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
116221147
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
116221147
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
116221147
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
char03037
]
116221147
04147 Exosome [BR:
char04147
]
116221147
Cilium and associated proteins [BR:
char03037
]
Other cilia and associated proteins
Stereociliary proteins
116221147
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
116221147
Exosomal proteins of colorectal cancer cells
116221147
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
L_HMGIC_fpl
TMEM37
Motif
Other DBs
NCBI-GeneID:
116221147
NCBI-ProteinID:
XP_031426825
UniProt:
A0A6P8FTM9
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All DBs
Position
7:26377553..26378764
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AA seq
218 aa
AA seq
DB search
MVFLTTKLVERVSLFVSFGGLVTSFVTFFLPLWKTLNSDLNEMENWYEGLWHMCIFTEEL
GLHCKAYESTLALSADKLASRALMFISIGTGLLGVLVAFFGLEGVNVGAGHRRLKRALLI
TGGVLIWVSGLTTLAPVSLVAYLTVVEFWDENIPDVVPRWEFGEAMFSGWIAGLLLVVGG
SFLFVAVCMGDYEAEQAEDLAFSKETPRTQYYLKTEVL
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atggtgtttctaaccaccaagctcgtggagagagtgtccctcttcgtgtctttcggggga
ctggtgacctcgttcgtcacgttcttcttgcccctgtggaagaccctcaactcggacctg
aacgagatggagaactggtacgaggggctgtggcacatgtgcatcttcacagaggagttg
ggcctgcactgcaaagcctacgagtccaccttggcgctgagcgctgacaagctagcgtcg
cgggcgctcatgttcatctccataggcacggggctgctgggggtgctggtggcattcttc
gggctggagggagtcaacgtcggcgcgggacacaggcgactgaagagggctctgctcatc
acgggaggggtcctcatctgggtgtcgggcctcaccaccctggcccccgtgtcccttgtg
gcctatttgactgtggtggagttctgggatgagaacatccccgacgtggtgccgcgctgg
gagtttggcgaggccatgttttccgggtggatcgcgggactccttctggtggttggtggg
tctttcttgttcgtggctgtatgtatgggggattacgaggcggagcaggctgaagattta
gccttctcgaaggagacaccaaggacacagtactacctaaagacagaggtcctatag
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