Clupea harengus (Atlantic herring): 116221204
Help
Entry
116221204 CDS
T09045
Name
(RefSeq) clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04142
Lysosome
char04144
Endocytosis
char05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116221204
04142 Lysosome
116221204
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
116221204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
116221204
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
char04147
]
116221204
Membrane trafficking [BR:
char04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
116221204
Exosome [BR:
char04147
]
Exosomal proteins
Proteins found in most exosomes
116221204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_Vps41
TPR_PEP5_VPS11
TPR_COPA_B
Gp18_dom_I
Motif
Other DBs
NCBI-GeneID:
116221204
NCBI-ProteinID:
XP_031427032
Ensembl:
ENSCHAG00000007778
UniProt:
A0A6P8FV47
LinkDB
All DBs
Position
7:complement(3162025..3183216)
Genome browser
AA seq
1150 aa
AA seq
DB search
MESDKFICVREKVGEQNQVVIIDLADPTNPIRRPITADSAIMNPASKVIALKDASRTLQI
FNMEMKSKMKAHTMTDDVMFWKWISVNTIGLVTDTAVYHWSMEGDSQPIKMFDRHASLAG
CQIINYRTDEQQKWLLLIGISAQQNRVVGAMQLYSVDRKVSQPIEGHAAAFGQFTVEGNP
NSSTLFCFSVRGAAGGKLHIIEVGQPAAGNQPFTKKAVDVFFPPEAQTDFPVAMQIGAKY
GVIYLITKYGYIHLYDIETGVCIYMNRISAETIFVTAAHESTSGIIGVNKKGQVLSVCVE
EENIVNYATNVLQNADLALRLAVRSNLPGAEELFTRKFNTLFSQGSYTEAAKVAASAPKG
VLRTADTIRQFQSVSAAPGQASPLLQYFGVLLDQGQLNALEALELCRPVLQQGRKQLLEK
WLKAEKLECSEELGDLVKPVDPTLALSVYLRANVPNKVIQCFAETGQFQKIVLYAKKMGY
TPDWISLLRSVMRAGPDQGLQFAQMLVQDEEPLANINQIVDVFMEGSLVQQCTSFLLDAL
KSNKPEEGHLQTRLLEMNLMHAPQVADAILGNQMFTHYDRTHIAQLCEKAGLLQRALEHY
TDLFDFKRTIVHTHLLNPEWLVNFFGALSVEDSVECLRAMLSANLRQNLQLAVQVASKYH
EQLGIHTLLELFESFKSYEGLFYFLGSIVNFSQDPDVHYKYIQAACKTGQIQEVERICRE
SNCYDPERVKNFLKEAKLTDQLPLIVVCDRFDFVHDLVLYLYRNSLQKYIEIYVQKVNPS
RLPVVLGGLLDVDCSEDVMKNLLMSVKGPFSTDDLVAEVEKRNRLKLLLPWLESRLSEGS
EEPATHNAVAKIYIDSNNNPERFLRENLFYDSVVVGRYCQKRDPHLAFVAYERGQCDQEL
IKVCNENSLFKSESRYLVRRKDAELWAGVLEEDNPFRRQLIDQVVQTALPETQDPEEVSV
SVKAFMTADLPNELIELLEKIVLDNSVFSEHRNLQNLLILTAIKADQTRVMEYINRLDNY
DAPDIANIAISNQLFEEAFAIFKKFDVNTSAIQVLIEHIGNLDRAYEFAEQCGEAGVWSQ
LACAQLQRELVRDAIDSYIRAEEPSAYMEVVSAASRNNNWEELVKYLQMARKKSRESYVE
TELIFALAKT
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atggagtcggacaagttcatctgcgtgcgggagaaggtcggcgagcagaaccaggtggtc
atcatcgacctggccgacccaacaaaccccatccgtcggcccatcacggccgacagcgcc
atcatgaaccccgccagcaaggtcatcgcccttaaagatgcctcacgcacactccagatc
ttcaacatggagatgaagagcaagatgaaggcccacacgatgacggacgatgtcatgttc
tggaagtggatctccgtcaacaccattggtctggtgaccgacacggccgtctaccattgg
agcatggagggggactctcagccaatcaaaatgttcgaccggcacgcaagcctggccggt
tgtcagattataaactacaggacagacgaacagcagaaatggcttctcctcataggcatc
tcagcacagcaaaaccgagtggtgggggcgatgcagctgtactccgtggacaggaaggtg
tcacagcccatcgagggccacgccgcagccttcggccagttcaccgtggaggggaacccc
aactcctccaccctcttctgcttctccgtcaggggcgcggctgggggaaagctgcatatc
atagaggtgggtcagcctgctgcaggtaaccagcccttcactaagaaagcagtggatgtc
ttctttcctcctgaggctcagacagactttcccgttgccatgcagattggtgctaaatat
ggcgtcatctacctcatcaccaagtacggctacatccacctgtatgacatcgagacgggg
gtgtgtatttacatgaaccgcatcagcgctgagaccatctttgttacggctgcccacgag
agcacatccggcatcataggggtcaacaagaaaggacaggtcctgtcagtgtgtgtagag
gaggagaatatcgtgaactatgccactaacgtgctgcagaatgcggacctggctctgagg
ctggccgtgaggagcaacctgcccggagccgaggagctcttcacacgcaagttcaacacg
ctcttcagccagggcagctacacagaggccgccaaggttgctgcttctgctcctaagggg
gttctgcgtacggcggacaccattcgtcagttccagagtgtgtctgcggcccctggccag
gcctcccccctgctgcagtactttggggtgctgttggaccagggccagctcaacgccctg
gaggctctggagctctgcagacccgtcctgcagcagggacgcaaacagctgctggagaag
tggcttaaagctgagaagttggaatgctccgaggagctcggggatctggtgaagccggtg
gaccctaccctggctttgagcgtctatctgcgggccaacgtcccaaacaaagtcatccag
tgcttcgccgagactggacagttccagaagatcgtgctctatgcaaagaagatgggttat
actcctgattggatctctcttctgaggagtgtgatgagggcgggcccagatcagggcttg
cagtttgcccagatgttggtgcaggacgaggagcccctggccaacatcaaccagattgtg
gacgtgttcatggagggcagtctggtacagcagtgtacttcattcctattggacgccctc
aagagcaacaagccagaggaggggcatctacagacacgcctcctggagatgaacctcatg
cacgcccctcaggttgcagatgctatcctgggcaaccaaatgttcacacactatgaccgc
acacacatcgctcagctgtgtgagaaggcagggctgctacagagagctctggagcactac
accgacctgtttgacttcaagagaaccatcgtacacacacacctgctcaacccagagtgg
ctggtgaacttctttggcgccctgtcagtggaggactcggtggagtgtctgcgggcgatg
ctctctgccaacctcaggcagaacctccagctggccgtccaggtggcgtccaaataccac
gagcagctgggcatacacacgctgctcgagctctttgagtccttcaagagctatgagggc
ctgttttacttcctgggttccatcgtgaacttcagccaggacccagacgtccactacaag
tacatccaggcggcctgtaagacgggccagatccaagaggtggagcgcatctgcagagag
agcaactgctacgaccctgagcgggtgaagaacttcctcaaggaagctaagctaacggat
cagctgcctcttatcgtagtgtgtgatcgctttgactttgtccatgacctggtcctgtac
ctctaccgcaacagcctgcagaagtacatcgagatctacgtgcagaaggtaaaccccagc
cggctgcctgtggtgttgggtggtctgctggacgtggactgctctgaagacgtgatgaaa
aacctcctcatgtccgtcaagggccccttcagcaccgacgacctggtggccgaggtggag
aagaggaacagactgaagctcctcctcccttggctggagtcccgcctttcagagggctcc
gaggagccggctacccacaatgccgtggccaagatctacatcgacagtaacaacaacccg
gagcggttcctgcgggagaacctgttctatgacagtgtagtggtgggccggtactgccag
aagagggatccacacctggccttcgtggcctacgaaaggggacagtgtgaccaggagctc
atcaaggtgtgcaacgagaactcgctcttcaagagtgaatcgcgttacctggtgcggcgg
aaggacgcggagctctgggctggtgtgctggaggaagacaaccctttcaggcggcagctg
atcgaccaggtggtacagacagcccttcctgagacacaggacccagaggaggtgtctgtg
tcggtgaaggccttcatgacagccgacctgcccaatgagctcatcgagctgctggagaag
attgtcctggacaactcagtcttcagcgaacacagaaatctgcaaaacctgttgatcctg
acggccattaaggctgaccaaacacgtgtcatggagtatatcaaccgcctggacaactac
gatgctcctgacatcgccaacattgccatcagcaaccagctcttcgaggaggctttcgcc
atcttcaagaagtttgatgtcaatacttcagcgatacaggtcctgatagagcacattggt
aacctggaccgggcgtatgagtttgcggagcagtgtggggaggccggggtgtggagtcag
ttggcgtgtgcccagctgcagagggagctggtgagggacgcaatcgactcctacatcaga
gccgaggagcccagcgcctacatggaggtggtcagcgccgccagccggaacaataactgg
gaggaactggtgaagtatctgcagatggcgaggaagaagtctcgggagtcttacgttgag
actgagctcatctttgctctggctaagacc
DBGET
integrated database retrieval system
