KEGG   Clupea harengus (Atlantic herring): 116221508
Entry
116221508         CDS       T09045                                 
Name
(RefSeq) notchless protein homolog 1-like
  KO
K14855  ribosome assembly protein 4
Organism
char  Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:char00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:char03009]
    116221508
Ribosome biogenesis [BR:char03009]
 Eukaryotic type
  Pre-60S particles
   Other pre-60S particles
    116221508
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_IFT122_1st WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Beta-prop_WDR3_2nd Beta-prop_EML_2 EIF3I Beta-prop_WDR36-Utp21_2nd WD40_Gbeta WDR55 WD40_MABP1-WDR62_2nd ANAPC4_WD40 DSE1_N Beta-prop_Aladin Beta-prop_WDR19_1st Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_WDR36-Utp21_1st Beta-prop_WDR41 Beta-prop_SCAP ASA1 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_EML NBCH_WD40 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st NLE CFAP251_N Beta-prop_IFT140_1st Beta-prop_VPS8 Beta-prop_EIPR1 Beta-prop_DCAF12 Beta-prop_NOL10_N Beta-prop_HPS5 Beta-prop_DCAF4 TRM82_WD PAC11 WD40_RFWD3 Beta-prop_Nup120_160 RMC1_N Beta-prop_SPT8 eIF2A Tricorn_2nd PD40 Cytochrom_D1 Beta-prop_NWD2_C Beta-prop_WDR75_2nd PALB2_WD40 Tenui_PVC2
Other DBs
NCBI-GeneID: 116221508
NCBI-ProteinID: XP_031428181
Ensembl: ENSCHAG00000023974
UniProt: A0A6P8FIG2
LinkDB
Position
8
AA seq 472 aa
MSGEEVERMLIQFQDEAGEALGSQFDVPLDITPDKLQLVCNALLQKEEPVPLLFFVRDAE
VVSSLRTCVQSLGVETEQVLPVVYQPQAVFRVRAVARCTSSLEGHTEAVISVAFSPTGKY
LASGSGDTTVRFWDLSTETPHHTVKGHTHWVLAISWSPDGKKLASGCKNSQVFLWDPVTG
QQLGKTLTGHSKWITCLCWEPLHLNPECRYLASSSKDGSVRIWDTVLGRCDKILTGHTQS
VTCVKWGGDGLLYTSSQDRTIKVWRSKDGVQCRTLQGHAHWVNTLALSTDYVLRTGAFEP
ATATINAQDLKGSLEEIKEKALERYDKVRGQGSERLVSGSDDFTLFMWNPAEEKKPVARL
TGHQALINEVLFSPDARLLASASFDKSIKIWEGRSGKYLASLRGHVSAVYQVAWSADSRL
LVSGSSDSTLKVWDVKTGKLHTDLPGHADEVRGWRRAHLAACLGSPIKVPHL
NT seq 1419 nt   +upstreamnt  +downstreamnt
atgagtggagaagaagtggaacgtatgctgatacagtttcaggatgaagctggtgaggcc
cttggatcccaattcgatgttcccctcgacatcaccccagacaaactgcagctggtctgt
aatgctctgctccagaaggaggagccagtgcccctgctgttctttgtgcgagacgcagag
gtggtgtcgtccttgaggacgtgtgtgcagagcctgggtgtggagacggagcaggtgctc
cccgtggtgtaccagccccaggcggtgttcagggtgcgggccgtagcgcgctgcacaagc
tccctggagggtcacaccgaagcagtcatatctgtagcattcagccccaccggaaagtat
ttagccagtggttcaggtgacaccactgtcaggttctgggatttgagcactgagacccct
caccacactgtcaaaggccacacacactgggttctggctatttcctggtcaccagatggc
aagaagttggcctcaggctgcaaaaatagtcaggtcttcctatgggatccagtcacagga
cagcagctggggaagactctaacaggccactctaagtggatcacctgcctatgctgggag
cctctgcacctgaacccagagtgccggtacctggccagctcctcaaaagacgggagtgtt
cggatctgggacacggttctgggtcgctgtgataaaatcctcacgggtcatacccagtcc
gtgacctgtgtgaaatggggtggagatgggctgctgtatacctcgtcacaggacaggacc
atcaaggtctggagatccaaagatggggttcagtgccgcaccctccagggtcacgcccac
tgggtgaacaccctggccctcagcacagactacgtgctcaggaccggagccttcgagccg
gccacggccaccatcaacgcgcaggacctcaaaggctcattagaagaaattaaagagaaa
gccctggaacggtatgacaaagtcaggggtcaaggctctgagcgtctggtgtccggctcg
gacgacttcacgctgttcatgtggaaccctgcggaggagaagaagcccgtggcgcgcctc
accggccaccaggccctcatcaacgaggtgctcttctcaccagacgcacgcctgctggcc
agcgcctccttcgacaagtccatcaagatctgggaaggacgcagcggcaagtacctggcg
tccctgcgaggtcacgtgtcggccgtgtaccaggtggcgtggtcagcggacagccgcctg
ctggtaagcggcagcagtgacagcacactgaaggtgtgggacgtgaagacgggcaaactg
cacaccgacctgccggggcacgccgatgaggtgaggggctggagaagggctcacctggcc
gcatgcctgggttcaccaattaaagttcctcacttgtga

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