Clupea harengus (Atlantic herring): 116221572
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Entry
116221572 CDS
T09045
Symbol
plrdgb
Name
(RefSeq) PITP-less RdgB-like protein
KO
K24069
membrane-associated phosphatidylinositol transfer protein
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
116221572 (plrdgb)
Membrane trafficking [BR:
char04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
116221572 (plrdgb)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LNS2_PITM1-3
PITM1-3
DDHD
Acid_phosphat_B
Motif
Other DBs
NCBI-GeneID:
116221572
NCBI-ProteinID:
XP_031428620
Ensembl:
ENSCHAG00000001965
UniProt:
A0A6P8FZ47
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Position
8:complement(27954084..28017378)
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AA seq
933 aa
AA seq
DB search
MKAPSRKLSASHWRLENIAQESTDSSDDEFFDARESFYRLHPRCAPQSSVDGLEDVERKC
RTQLLILVVHGGHILDSGGDADGKSDDTATLASVLERLAHAHFQAAADGMVVRLVPCPPV
CSEAFTLVSHLNPYSYDESCVSSSVDHLPLAALPLLTITTPRYQDAVAAIIHQANQVYSD
FLQSAEGIGFSGQVCLVADCIGGVLCFDALCFSGDKRHTVPGATKKHDSNENLKESSSAP
ADSLSPNLLGSKRLSKSNIDVSVPTDTPSAPPHPLIRKQSDSCSADIMSLLQGEHSRTRL
ASGPGSFDFEVSDCFLFGCPLGLVLAMRKTVLPAFQVSQLQPACSQLFNLSLSVSCRFPI
VSQLQPACSQLFNLFYPSDPSASRLEPLLHPKLRQLSPFSVPRYQRYPLGDGRSTLIADA
VLKNPGGSTVVVTEPPLEGLPSAEVDIVFEEDIGDEPPQETRLSRSDSETSATSQHQPVS
HLIDFCGQWWGLKRLDYVLFCPDVLTTFPTVALPHLFHASYWESTDAVAFILRQVLRCDC
LKAGKADCCDTTPLCPSSPREKWLRRRTHVKLRNVTANHRVHDVIATEDGFQTLVGRFMY
GPLDMVTLTGEKVDVFLMSQPASGRWVLFDTELTSNSGRVSYTIPASKRLPVGVYPIKMV
VRGDQTSAEAFLTVLPKGMECVVFSIDGSFAASVSLMGSDPKVRAGAVDVVRHWQDRGYL
IIYITGRPDMQKQRVVSWLTQHNFPQGMVFFSEGLVHDPLRQKTIFLRSLVQECHIKISA
AYGSMKDMSVYSTLGLSPLQIYIVGRPSKKHQNQCQFLSEGYAAHLSSLEFEHGSCTKKG
RMIPRQASFGLTTKSDFLSPSPDFLSCKRTPLLRRAMSVQQPSPPSSTTATPKPERAHSQ
PERAHSQCERAHSQCEVHVDGVEPVLIRGDHTP
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgaaagcaccgtcccgcaagctcagtgcgtcccactggcgtctggaaaacattgcacag
gagtctacagacagctctgacgacgaattctttgatgctcgggagagtttctacaggttg
caccctcgctgtgctccccagagtagtgtggatggcctggaggatgtggagaggaagtgc
cgcactcagctcctgatcctggtggtccacggcggacacatcctggactctggcggcgac
gctgatggcaagtcggacgacacagccaccctggcctccgtcctggagaggctggcacat
gcccacttccaggcggctgcggatggcatggtggtgcgcctggtgccctgcccgccggtg
tgctccgaggccttcaccctggtgtcacacttgaatccctacagctacgatgagagctgt
gtgtcgagcagtgtggatcacctgccactggccgccctcccactgctcaccatcaccaca
ccacgctaccaggatgccgtggcagccatcattcaccaggccaaccaagtgtacagcgac
ttcctgcagtctgcagaggggattggcttctctggacaggtatgcctggtagctgactgt
attgggggcgtcctctgttttgacgccctctgcttcagtggagacaagagacacacagtc
cctggtgccacaaagaagcatgacagcaatgagaatctgaaggagagctcctcagctcct
gctgacagcctgagccctaacctgctgggaagcaagcgcctgagcaagagcaacattgat
gtgtccgtgcccaccgacacgccgtccgcacccccccaccctctcatacgcaagcagagc
gactcctgcagcgctgacatcatgagtctcttacagggagaacacagcaggacccgcttg
gcgtccggccccggctccttcgactttgaggtgtcggactgcttcctctttggctgtcct
ctcggtctggttctggccatgaggaaaacggtcctgcctgcttttcaggtatcccagctc
cagcctgcgtgctcccagctcttcaatctctctctctctgtgtcctgtcgctttcccata
gtatcccagctccagcctgcgtgctcccagctcttcaatctcttctacccctcggacccg
tccgcctcgcgcctggagcccctcttgcaccccaaactccggcagctgtccccgttctcg
gtgccccgctaccagcgctaccccctgggagacggacgctccaccctgatagctgacgct
gtgttgaagaacccagggggttccacagtggtggtaacggaacccccacttgagggcctg
ccctcagctgaagtggacattgtgtttgaagaagacatcggcgacgaacccccccaggag
acgagactgagccggagcgacagtgaaacatcagccacctctcagcaccaacctgtcagc
cacctcatcgacttctgcggccagtggtggggcttgaagcggctggactatgtgctcttc
tgcccagacgtcctcactacgttccccacggtggccctaccccacctgttccacgcgtcc
tactgggagtccacagatgctgtggccttcatcctacggcaggtgttgcggtgtgactgc
ctgaaagcaggcaaagcggactgctgtgacaccacacccctgtgtccctccagcccgcgg
gagaagtggctccgacgacgcacacacgtcaaactacggaatgtcactgccaatcacagg
gtgcatgatgtcattgccacggaggacggtttccagactctggtgggtcggttcatgtac
ggccccctggacatggtcacactgacgggggagaaggtggatgtatttttgatgtctcag
cctgcatcgggtcgctgggtgctctttgacactgagctcaccagcaacagtggccgtgtg
tcatacaccatccctgcaagcaagcgacttcctgttggagtctaccccataaaaatggtg
gtcaggggggaccagacgagtgcggaggcctttctgactgtgctgcctaagggcatggag
tgtgtggtgttcagcatcgacggctcgttcgctgccagcgtgtccctgatgggcagcgac
cccaaggtccgcgcaggagcggtggatgtcgtcaggcactggcaggaccggggctacctg
atcatctacatcacggggcgcccggacatgcagaagcagagggtggtgtcatggctgact
cagcacaacttcccccagggcatggtgttcttctccgagggcctggtgcacgaccccctc
cggcagaagaccatcttcctcaggagcctggtgcaggagtgccacattaagatcagtgcc
gcctacggctccatgaaggacatgtctgtgtacagcacactgggcctgagccctttgcag
atatacattgtgggcaggccgtccaagaagcaccagaaccagtgtcagttcctgagtgag
ggctacgctgcgcacctctcctccctggagtttgagcacggctcctgcaccaagaagggc
cgcatgatcccacgccaggcctcctttggcctcaccaccaagtccgacttcctgtccccg
tctcccgacttcctgtcctgcaagcgcacgccgctactgcgacgggccatgtccgtgcag
cagccctctccaccctcctccaccactgccacaccgaagcctgaacgtgcccacagtcag
cctgaacgtgcccacagtcagtgtgaacgtgcccacagtcagtgtgaagtccatgtggat
ggagtggaacctgttctcatcagaggggaccacactccctga
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