Clupea harengus (Atlantic herring): 116221739
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Entry
116221739 CDS
T09045
Name
(RefSeq) glial fibrillary acidic protein-like
KO
K07610
desmin
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116221739
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
char04812
]
116221739
Cytoskeleton proteins [BR:
char04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
116221739
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Filament
DUF6236
DUF4164
OVT1
TPR_MLP1_2
PUMA_CC
DEDD_Tnp_IS110
Tropomyosin
DUF7491
Motif
Other DBs
NCBI-GeneID:
116221739
NCBI-ProteinID:
XP_031428717
UniProt:
A0A6P8FZU9
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Position
9:12549457..12552460
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AA seq
432 aa
AA seq
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MFSRPVFDRICLICFHLSVRHRLAVSKCAFWLRKRSSALLALLWASSIFEHVALAHRGHN
LCVLLSPKVRSLEQQNKLLETEIEALQNRFLKPTGLRMLYEEQLKELRRLADQMRKQRDL
AVAAKDARAGQLEMMKAKYEEAVELRRKAEMDIENFRPDVDAATSSRIALEKQLENLEVE
IEFLKRIQREEIEDLMKQIYSAHATAGEAFALPDIAAALKQIQHEYDVIAAKNLQEMDSW
YNSKFEDLNNKTTNHVDKVRGAREELASAKKDIQGKERDMDGLKTKNDGLEAQILAAQER
HKKELEALQARIEALHLELKTTKGKIAQLLMEYQDLLNVKMSLEIEITTYRKLIEGEDMR
ITSMVQGVMGMSAISAGAIGVMGLGALGAGTGGAANGGLGAGVENGAHGQTIATYSQEQA
VEMTERKTVLIW
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgttttctaggcccgtctttgacagaatttgtctgatttgtttccacttaagtgtgcgg
cacagactggctgtgtctaaatgcgccttctggctgcgaaaacggagcagcgcattactt
gcacttctttgggcctcgagcatattcgagcatgtagcgctcgcacacaggggccataat
ttatgtgtcctcctgtccccaaaggttcggtcactggagcagcagaataagctgctggag
acagaaatcgaggccctccagaaccgattcctgaagcccacgggcctgcgcatgctgtat
gaggagcagctcaaagagcttaggaggcttgccgatcaaatgagaaagcagcgggacctg
gctgttgctgccaaagacgccagggctggacagctggagatgatgaaggccaaatatgag
gaagctgtggaactgaggaggaaggccgagatggacatcgagaacttccgaccggatgtt
gacgcagccacctcctcgcgcattgctctggaaaagcaacttgagaacctggaggttgaa
attgagttcctgaagaggattcaaagagaggaaatcgaggacctgatgaaacaaatctat
tctgctcatgccaccgccggagaagccttcgccctccccgacatcgcggctgctcttaag
cagattcagcacgaatatgacgtcatcgcagcaaagaatcttcaggaaatggactcgtgg
tataattcaaaattcgaagatttaaacaataaaaccacaaaccatgtggacaaagtgcgt
ggagcacgagaggagcttgcatccgctaaaaaagatattcaaggcaaagagagggacatg
gatggtctgaagaccaaaaacgatggtctggaggctcagattcttgcagctcaagagaga
cacaagaaagagctggaggctctccaggccaggatcgaagctcttcatttagagctgaaa
accacaaaggggaaaattgcacagcttctcatggaataccaggacttgctgaatgttaag
atgagcctggagattgagatcactacatacaggaagctgattgagggcgaggacatgcgc
atcaccagtatggtgcagggggtgatgggcatgagtgccatcagtgctggggcgatcgga
gttatgggtctcggggccttgggagccggaaccggtggagctgccaatgggggacttgga
gccggtgtggaaaatggcgcccacggccagaccatcgccacctactctcaggagcaggcc
gtggagatgactgagaggaaaaccgtgctcatttggtaa
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