Clupea harengus (Atlantic herring): 116222017
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Entry
116222017 CDS
T09045
Name
(RefSeq) keratin, type I cytoskeletal 13-like
KO
K07604
type I keratin, acidic
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
char04812
]
116222017
04147 Exosome [BR:
char04147
]
116222017
Cytoskeleton proteins [BR:
char04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Types I and II: Acidic and basic keratins
116222017
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
116222017
Exosomal proteins of other body fluids (saliva and urine)
116222017
Exosomal proteins of colorectal cancer cells
116222017
Exosomal proteins of melanoma cells
116222017
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
CENP-F_leu_zip
ATG16
GAS
Motif
Other DBs
NCBI-GeneID:
116222017
NCBI-ProteinID:
XP_031430088
Ensembl:
ENSCHAG00000011786
UniProt:
A0A6P8FPJ7
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Position
1:complement(3012622..3016440)
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AA seq
450 aa
AA seq
DB search
MATTFSSRMSLSGTSSISGGSSGFSLSGGGARMSIMRAGSVYGGAGGAGVRMSSGSRTLS
LGGGGGGGGASFGFSSAGGFGGGFGGGFGGGLAAANGAVVSNEKFTMQNLNDRLANYMIK
VQTLEKANAALELNIRQFLESRVGPEAHDYRTFQAVISDLQGKIQAFISSKGSINLGIDN
ASLALDDYKLKYDSEVAMRQTAEADVVGLRAVLGDLTFAKNDLAMRLSGLQEELVVLKKN
HGEDLLVLRARVGSKVDVEVDAAPQEDLSVVLAGVREHYEAVAAKNRTELGAWFQAKTES
LKKEVTTSTTTLQVSSSEVSTMKSTVQALQIELVSLTSMKANLEFTLTETKTRFAGMLSG
FQAQVSSLEVQLTQLRANLETQSSEYSILLDIKTRLEIEIAEYNRLLNGQASSSSSSSSR
TKYVTVVEEVVDGRVVSSSSSSSSNLVRLG
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccactttctccagccgcatgtcgctctctggcacatccagcatcagtggagga
tcgtctggcttctccctctctgggggtggtgctcgtatgagcatcatgagggccggcagt
gtgtacgggggtgcaggcggcgccggggtgcgcatgtccagtgggtcccgcacgctgtcc
ttgggtggtggtggtggtggtggtggtgccagcttcggcttctcctctgccggaggcttc
ggtggtggcttcggtggtggcttcggtgggggcctggcagcagcgaatggagctgttgtt
agcaacgagaagttcaccatgcagaacctcaacgaccgactcgcaaactacatgatcaag
gttcagaccctggagaaggccaacgccgccctggagctgaacatcagacagttcctggag
tccagggtcggtcctgaggctcacgactacaggacctttcaagctgtcattagcgacctg
cagggcaagatacaggccttcatcagctcaaaaggcagcattaatcttggcattgataat
gctagtctggctctggatgactacaaactcaagtatgacagcgaggttgccatgcgccag
accgcggaggctgatgtcgtcggcctgagagctgtgctgggagacctgacctttgccaag
aatgacctggcaatgcgtctgtctgggctgcaggaagaactggtcgtgctcaagaagaac
catggggaggatctgctggtcctgcgtgccagagttggcagcaaggtggacgtggaggtg
gacgctgcaccccaggaggacctctctgtggtcctggctggagttcgtgagcactacgaa
gctgtggccgccaagaacagaacggagctgggggcatggttccaggccaagacggagagc
ttgaagaaagaggtcaccaccagcacaaccaccctgcaagtcagcagctctgaagtgtcc
accatgaagagcactgttcaggctctccagatcgaacttgtgtcccttaccagcatgaaa
gccaacctggagttcacactcaccgagacgaagacccgcttcgctggcatgttgtccggg
ttccaggcgcaggtgagcagcctggaggttcagctgactcagctccgcgcaaacctggag
actcagagctcggagtacagcatcctcctggacatcaagaccagactggagatagagatc
gcagagtacaacagactgctgaatggccaagctagcagcagctcctcgtccagctccagg
accaagtacgtcacggttgtggaagaggtggttgatgggagggtcgtgtcctcctcgtct
tccagttcctctaacctggttcgtctcggctga
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