Clupea harengus (Atlantic herring): 116222025
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Entry
116222025 CDS
T09045
Name
(RefSeq) 5-hydroxytryptamine receptor 3A-like
KO
K04819
5-hydroxytryptamine receptor 3
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
116222025
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
char04040
]
116222025
Ion channels [BR:
char04040
]
Ligand-gated channels
Serotonin (5-HT3)
116222025
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Paralog
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
Motif
Other DBs
NCBI-GeneID:
116222025
NCBI-ProteinID:
XP_031430124
UniProt:
A0A6P8FTZ4
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Position
10:complement(28407372..28412249)
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AA seq
468 aa
AA seq
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MGTSCGYLFTSCAFLLTVSLCLCELTCREGHSGPTYESLNDVFDKKSYRPAVNLSTPTIA
NISFTLYAVLGVNEKTQILTTFLWLRLYWFHEFLIWDPEKCDGVTKISLPVNELWTPDII
IYEFVDDDVSQACPYVYVNHTGHIRYDRMLRLVSACNLEIFSFPFDIQNCTFTFGSYMHT
IKDVRVSPALSFAEMSGNSKQYLEASGEWELVVILGEASILQFGIDEWDIITFWVVIKRR
PMLYVVNLLIPSSFLMIIDILSFYLPPHSVDRASFKMTLILGYTVFLLIMNDLLPSTANG
TPIIGIYFSVCLALMVISLLETVVITNVLHTNSTKYRDVPHWVRVVVLGFIARLICYRWP
EEITSVVQEKPDNSGTRAIQPPAQSTPAHQSRNMSGVLPLAVPELTQICQDVNVIRSHIS
DLQKASEMMDQWCHVGYILDFLLFRIYLMLITCYAVVIICMWCIWIYQ
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atgggaacttcttgtgggtacctgttcacatcctgtgcctttctgctgacagtgtctttg
tgtctctgcgaactgacctgtcgcgagggtcacagcggacctacctatgaatcactcaac
gatgtgtttgacaaaaagtcctacagaccggcggtgaacctaagcactccaaccatcgcc
aacatctccttcactctctatgctgtgttgggtgtgaatgagaaaactcagatcctcact
accttcctctggcttagactgtattggttccacgagtttctcatatgggatcctgagaaa
tgcgatggtgtcactaaaatctccctgccagtgaatgaactctggacacctgacatcatc
atctatgaatttgtggacgatgacgtctcccaagcctgcccctacgtgtatgtcaatcac
acgggacacatccgctacgaccgcatgctcaggctcgtgagtgcctgcaacctggagatc
ttcagcttccccttcgacatccagaactgcaccttcaccttcggttcctacatgcacaca
ataaaggatgtgagggtcagcccggccctgtcctttgctgagatgtcggggaactctaag
cagtacctggaggccagtggggagtgggagctggtggtcatcctgggagaagcgagcatc
ctgcagtttggaatagacgagtgggacatcatcactttctgggtggtcattaagagacgg
cccatgctgtacgtggtcaacctcctgatccccagctctttcctcatgatcatcgacatc
ttgtccttctacctgccgccacacagcgtggacagagcctcctttaagatgacactcatc
ctggggtacaccgtcttcctgctcatcatgaacgacctgctgcccagcactgcaaacggc
acccccatcataggcatctacttctctgtgtgtctggccctgatggtgatcagcctgctg
gagacggtcgtcatcaccaacgtgctccacaccaactccacaaagtaccgcgacgtgccc
cactgggtgcgtgtggtggtcctgggcttcatcgcccggctcatctgctacaggtggccc
gaggaaatcacttctgtggtccaggagaagccggacaactcggggacccgtgccatccag
ccacccgcccaatcaacaccggcgcaccaaagccgaaacatgtctggagtgctgccgctg
gctgtgccggagctcactcagatctgccaggacgtgaacgtgatccgctcgcacatctcc
gacctgcagaaggcgagcgagatgatggaccaatggtgccacgtggggtacatcctggac
ttcctgctcttccgcatctacctgatgctcatcacctgctatgcggtagtcatcatctgc
atgtggtgcatatggatctaccagtga
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