KEGG   Clupea harengus (Atlantic herring): 116222026
Entry
116222026         CDS       T09045                                 
Symbol
wdr18
Name
(RefSeq) WD repeat-containing protein 18
  KO
K14829  pre-rRNA-processing protein IPI3
Organism
char  Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:char00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:char03009]
    116222026 (wdr18)
Ribosome biogenesis [BR:char03009]
 Eukaryotic type
  Pre-60S particles
   5-FMC complex
    116222026 (wdr18)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR90_POC16_2nd WD40_CDC20-Fz WDR55 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_EML WD40_MABP1-WDR62_1st Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 NBCH_WD40 Beta-prop_TEP1_2nd Beta-prop_IFT122_1st Beta-prop_SCAP Beta-prop_WDR75_1st Beta-prop_SPT8 Beta-prop_NWD2_C Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_WDR75_2nd WDR90_beta-prop_4th Beta-prop_IFT140_1st WDR54 KNTC1_N
Other DBs
NCBI-GeneID: 116222026
NCBI-ProteinID: XP_031430127
UniProt: A0A6P8G3N1
LinkDB
Position
10:28623325..28654196
AA seq 267 aa
MSAPMEVVVSADSSGQLWNCAVFDLHSGTNLLSYRGGNSSSRSLTVLNGEYILGAQLGKN
FINVWEVQRKDQLQQKIVCPGIVTCLTASPDGLYLLAGIADAIYLWEVSTGNLLAILSRH
YQDLTCLCFTDDSSHFISGGKDNIVLIWSLVSVVQLDPSHSTEPRHVLSRHSLPITDIHC
GLMGAQARVATASLDQTVKLWEVSSGEMLLSVLFDVSIMSVTLDPCEYFLFCGGSDGTIY
QVSLRSPVSLSVLSASLLLQTSTTLPS
NT seq 804 nt   +upstreamnt  +downstreamnt
atgtcggcgcccatggaggtagtggtttctgccgattcaagtggacagttatggaattgt
gcagtttttgatcttcattcagggacaaatcttctgtcctatcgaggtgggaacagttcg
tcaaggtcccttactgttcttaatggagaatacattcttggagcacaactgggaaagaac
ttcatcaacgtatgggaagtacagaggaaggaccagctccagcagaagatagtgtgccca
ggcattgtgacctgtctcaccgcctcacctgacggcctctacctgctagcgggcatcgct
gatgctatttacctatgggaggtgtccacgggcaacctgttggccatcctgagccgccac
taccaggacctgacatgcctttgcttcacagatgacagcagtcacttcatctctggaggg
aaggacaacatcgtgctcatctggagtctggtcagtgtggtgcagttggacccctctcac
tctaccgagccccgtcacgtcctgtcacgccactcgctgcccatcaccgacatccactgc
gggctcatgggagctcaggcgcgcgtggccaccgcctctctcgaccagaccgtgaagtta
tgggaggtctcctcaggtgagatgctgctgtctgtgctctttgatgtgagcatcatgtcg
gtgacccttgacccctgcgagtacttcctgttctgtggaggcagtgacgggaccatctat
caagtgtctctgcgcagcccggtaagtctatcagttctgtctgcctctctccttctacag
acatccactaccctaccctcataa

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