Clupea harengus (Atlantic herring): 116222084
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Entry
116222084 CDS
T09045
Name
(RefSeq) desmoglein-2-like
KO
K07597
desmoglein 2
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116222084
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
char04515
]
116222084
Cell adhesion molecules [BR:
char04515
]
Cadherins
Major cadherins
116222084
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
RET_CLD1
SGBP_BT4661-like
Cadherin_2
Fibulin_C
Cadherin_CELSR2_9th
Motif
Other DBs
NCBI-GeneID:
116222084
NCBI-ProteinID:
XP_031430699
UniProt:
A0A6P8FVG8
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Position
10:complement(9802123..9817639)
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AA seq
1249 aa
AA seq
DB search
MAFRNLLLLTGLALVALSEGARQRRNSQRKRQKREWIISPKLLTENEDHRHLDFVAKIRS
DRDDGLPVVYFLKGPGADENPVNLFIVNKDGLVKITAILDREQQSEYNMTGYAKFKHNDS
LAEAPIAVNIKVQDQNDNAPVLPQLPTVSIYEDSPEGTFVAQVHAMDADEPGTAHVAIAY
SVVKQEPEDGKIHFRADKATGKIYVQSELDREKTSSYILTVQAADMGGEPGGLTGTSTMM
VHILDVNDIVPKLEKDEFSVSIDENLADVEVLRFKTLDDDLKGSDNSRAVFHIVSGNEDD
YFSVYTDPRTNEGVLMLKKPVDFEAVPNLNLGVVVMNQAPEGARVPGDAAGSDGAGGGGD
GGAGRPGGGGGAGGPGGGGGTGGTWSISSKYKRYPVKISVNNKPDGPVYRPSTKPISLPE
GKGQLSIPKVIGTFPATDGDTGEQAQDVRYAKGYDPGNWFTIDEETAEITLNKMPDRESP
YVVNGTYLAKILCMTNGMPTQTATGTIAVHVEDTNDNCPTLTSHVQYLCSDTKVVNVTAE
DLDGDPNGPPLEFTLLDEGVGVKWRLQQTGDASAALWAEDGLWPGLYEVTFEIRDQQGLA
CPDRQVLKLEVCTCQGGLTSCAPEEVQSGVTTSKKSSQLGGAAVGGMLLGLLALLLVPLM
ALFCSCGGASGLAGGFTDLPFDAKAHLISYHTEGKGEDREVPLMSVPVLISKVIPVTASA
NMATTTMVSRQMQENAFGGFYDYNEPDMGNMDSSAHWDYTSDLPEMREEDQLSFMALPDT
FLDHYFSQKAEHTAVTSCPRDNLLVYECEGRGSPANSVGCCSLLESEDDLQFLNDLGSKF
ATLAQICGYSKVTSPRMDHQITPPMSEMDTRIIMTTDVKKQTRESRSSKISNHEAPPVRM
ERSVSFVEEHSPPPLPRMQLCETMAMPTQTVLVQQQPLYYMVEPQVQSTVLLAERPPVGL
GQGVILVNGSQTATERVLLQGGGLVQGGGLVQGGGLVQGGGLVQGGGLVLQQGGHVQGAQ
GMLIQNGQHVPGSQESTGLFLVSSGQAATGGLVHQGDGLVQGGQMVEVQGDQQHSPGSPT
MFLMNKGQTLKHRPGSPFTSQPLHAANTCGSPVLLVDGGMRQGGEIQLDTMQRGSTKAQV
VHGSQFFVEAQTLPRGPILQGDGHIQREPRRGPSSGRVCVGGPMPAQRVMLDQGPTGTGQ
VSTGQKGLQQLEVFPQAGVQGVEAEYGVCCYKLIPGVNTQQGLKRTSKH
NT seq
3750 nt
NT seq
+upstream
nt +downstream
nt
atggccttcaggaatctgctcttactgactggactggctcttgtggccttgtctgagggg
gcaagacagagacgaaactctcaacggaaaagacagaagagagaatggatcatcagtcct
aagctcctgactgagaatgaagatcacagacacctggattttgtggccaaaatccgatca
gaccgggatgatggactccctgtggtctacttcctgaaagggcctggggcagacgagaac
ccggtaaacctattcatagtcaacaaagacggcctagtcaagattaccgctattctggac
cgagagcagcagtcagaatacaatatgactggttatgcaaagttcaaacataatgattcc
ctggcagaggcccccatagcagtaaatataaaggtacaggaccagaatgacaatgctcca
gttttaccacaactgccaactgtcagcatctatgaggatagcccagaaggaacattcgtg
gcgcaagtgcatgcaatggatgcggatgagccaggaaccgctcacgtggctatcgcctac
agcgtggtgaagcaggagccagaggatggcaagatacatttccgtgctgataaagccact
ggcaagatttatgtccagtctgaacttgacagagagaaaaccagctcctacatcctcact
gtccaggcagcagacatgggaggtgagccagggggactgacaggaacatccactatgatg
gtgcacatcttggacgtcaacgacatagtccccaaactggaaaaggatgagttttcagta
agtattgatgagaatttggcagatgtcgaggtattgcgcttcaaaactttggatgatgac
cttaaaggatcagacaattcgcgagctgtgtttcacattgtgtcgggaaatgaggatgac
tacttcagcgtttacaccgaccccaggactaacgagggtgtgctgatgcttaagaagcct
gttgattttgaggcagttcctaacctgaacctgggggttgtggtgatgaatcaagcacct
gaaggagccagggtaccaggagatgcagcaggctctgatggtgccggtggtggtggtgat
ggaggagcaggacggcctggtggaggaggaggagcaggagggcctggtggaggaggaggg
actggagggacttggagcatttcttcaaagtataaaaggtacccagtgaagatcagtgtg
aacaacaaaccagatgggccagtctaccgcccaagcaccaagcccatctccctcccagag
ggcaaaggacaactttccatccccaaggtcattggcacctttcctgccacggatggagat
acaggagaacaggcccaggatgtcaggtatgcaaaaggttatgaccctggaaactggttc
accattgatgaggagacagctgaaatcacactcaataagatgccagaccgggagtctccg
tatgtggtgaatgggacctacctggccaagattctctgtatgacaaatggcatgcccacc
cagacagccacggggaccattgcagtgcatgtggaggacactaatgacaactgccccacg
ctcaccagccacgtgcagtacctgtgcagtgacactaaggtggtgaatgtgacagcagag
gatttggatggagaccctaacggtccgccgcttgagttcacgctgctggatgagggtgtg
ggggtgaagtggaggcttcagcagaccggagatgcttcagcagcgctgtgggctgaagat
ggtctttggcctggcctctatgaggtcacgtttgagatacgagaccagcaggggttggcc
tgtcctgacagacaggtcctcaaattggaggtgtgcacctgccaagggggcttgacttcc
tgtgctccggaagaggtgcagtcaggggttacaaccagcaagaagtcatcccaactggga
ggagccgcagtgggagggatgctgttaggcctcctcgcactcctgttggtcccactgatg
gctttgttctgctcctgtggaggagccagtgggcttgcaggaggcttcactgacctgccc
ttcgacgccaaggctcatctaatctcctatcacaccgaaggaaagggagaggaccgggag
gttcctctgatgagtgttccggtactaatctccaaagtaattccagttactgcttccgca
aacatggctaccaccaccatggtgagcaggcagatgcaggagaatgcattcggaggcttt
tatgactataatgagccagatatggggaacatggactccagtgcccattgggattatact
tcagatctgccagagatgagagaggaggatcagctctcattcatggcactaccagacaca
tttctggaccattacttctcacagaaagcagagcacacagcagtgacttcttgtccgagg
gacaatctgttggtgtatgaatgcgagggacggggatcccccgctaactctgtgggctgc
tgcagcctcctagagtctgaggatgacctccagtttctcaacgacttggggtcaaagttc
gccaccctcgcccagatctgtggatactccaaagtcacaagcccaagaatggaccatcag
atcacacctcccatgtcagaaatggacaccagaatcatcatgacaaccgatgttaaaaaa
cagacaagggagtccaggtcctcaaaaatcagcaaccacgaggcaccacctgtgcgcatg
gagaggagcgtcagctttgtggaggaacacagcccacccccacttcccaggatgcaactg
tgcgagaccatggccatgcccacccagactgtgttggtgcagcagcagcccctgtactac
atggtggagccgcaggttcagagcacagtgctgctggccgagaggcccccagttggtctg
ggtcagggagtgatcctggtgaacgggagccagacagccacagagagggtgctgctgcaa
ggaggaggtctagtgcagggaggaggtctagtgcagggaggaggtctagtgcagggagga
ggtctagtgcaggggggaggtctagtactgcagcagggcgggcatgttcaaggggctcag
gggatgctaatacaaaatggtcaacatgttcctggatctcaggagtctacaggcctgttc
ctggtgagcagcggccaggcagccacaggggggttggtccatcaaggagacgggctggta
cagggagggcagatggtagaggtgcagggggatcagcagcacagtcctggatctccgacc
atgtttctgatgaacaaagggcagacactgaagcacaggcccggatcccctttcaccagc
cagcctctgcatgcagccaacacgtgcggctctccagtgctgcttgtggacggaggcatg
aggcagggaggggaaatccagctagacaccatgcagcgaggttctactaaggctcaggtt
gtgcatgggtctcaattttttgtggaagcacagaccttacccagaggtccgattctgcag
ggggatgggcacatccaaagagaaccccggagaggccccagtagcggtagagtgtgtgtg
ggtggcccaatgcccgctcaaagggttatgcttgatcaggggccaactggcactgggcag
gtgtccacagggcagaagggcctgcagcagcttgaggtttttccccaggcgggagtacag
ggagttgaagcggagtatggagtgtgctgctacaagctcatacctggagtgaacactcag
caagggctaaagagaacctcaaaacactga
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