KEGG   Clupea harengus (Atlantic herring): 116222777
Entry
116222777         CDS       T09045                                 
Name
(RefSeq) integrin alpha-1
  KO
K06480  integrin alpha 1
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char04510  Focal adhesion
char04512  ECM-receptor interaction
char04810  Regulation of actin cytoskeleton
char04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:char00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    116222777
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    116222777
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    116222777
   04810 Regulation of actin cytoskeleton
    116222777
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:char04147]
    116222777
   04515 Cell adhesion molecules [BR:char04515]
    116222777
   04090 CD molecules [BR:char04090]
    116222777
Exosome [BR:char04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   116222777
Cell adhesion molecules [BR:char04515]
 Integrins
  Integrin alpha subunits
   116222777
CD molecules [BR:char04090]
 Proteins
  116222777
SSDB
Motif
Pfam: VWA FG-GAP FG-GAP_3 VWA_2
Other DBs
NCBI-GeneID: 116222777
NCBI-ProteinID: XP_031433316
UniProt: A0A6P8GA05
LinkDB
Position
12:25803768..25838185
AA seq 655 aa
MLYGMFYFGLTTLFVLLPTLTTFNVDEKNGLAFNGPIEDLFGYTVQQFENEEGKWVLIGS
PLWGQPANRTGQVYKCRVRKGMNTGCVMTSISADTTIPDIHEVKENMTMGTTLVSNPNGG
FLACGPQYGYMCGNQQFISGVCANVSSSFKVLNSIAPSVQACSKPLDIVIVLDGSNSIFP
WTSITDFLVRFLQNIDIGPTMSQVGIVSYGDNVGHEFNLSQFHNTNDALVHAKLIPQRTG
LRTMTAQGIEMARSEAFTVERGARLDAKKVMVIVTDGESHDNYMLKGVIDQCEEDGIERF
SIAVLGDYNRQNKSLEQVKTFIEEIESIASPPKGDHFFNVSDEVALLTIVDALEQRIFAL
EGTSDKNTSPLRMEYSQAGFSAHASKEALMLGAVGAFEWNGTVVMQQDGVTVEPDKATFH
NPLEERYEGMAGYVGYDVQSASTPDGILYITGAPRYNHTGRVTIYRFDGQNITVTQTLKG
QQIGSYFGSVLQTVDVDMDSYTDLLLVGSPMYMGSERDEQGQVYVFKLNKDGKFEPEMTL
KPEPQACANNIAIKNEPCGARFGTAIAAIPDLNLDGWADVVIGSPLENDHRGAVYIYHGN
KQKTLKEKYVQRIAAGGDGEKVKFFGQSIHGIMDLNEDGIIDVTIGGLGGASLYW
NT seq 1968 nt   +upstreamnt  +downstreamnt
atgctttacggaatgttttattttggcttaacgacgctttttgtgctgctgcccacgcta
acgacgtttaacgtggacgaaaaaaacggattggcgttcaatggcccgattgaggacttg
ttcggctacaccgtgcagcagttcgagaacgaggaggggaagtgggttctgattggctcc
cccctttggggccaaccagccaataggacgggacaagtctacaagtgtcgggtgcgcaaa
ggcatgaatactgggtgtgttatgaccagcatatcagcggacacgacaatcccggacata
catgaagtcaaggaaaacatgactatgggaaccacgctggtctccaatcccaacggtgga
tttctggcttgtggtccgcagtatggctacatgtgtgggaaccagcagttcatctcaggg
gtctgtgcaaacgtcagctcctcattcaaggtgctaaactccatcgccccctcagtgcaa
gcgtgttcaaagccgctggacattgtgatcgtgctggacggctccaacagcatcttcccc
tggaccagcatcactgacttcctggtccggttcctgcagaacatcgacatcggtcccacg
atgtcccaggtgggcatagtgtcgtacggagacaacgttggacacgagttcaatctgagc
cagtttcacaacaccaacgacgccctggttcacgccaagctaataccacagaggacaggc
ctgaggaccatgacagcgcaaggcatcgaaatggcacggagcgaggccttcacagtggaa
agaggcgcccggctagacgccaagaaagtcatggtgatcgtcacagacggcgagtcacac
gacaactacatgctgaaaggggtcattgatcagtgtgaggaggacggcatcgagaggttc
tccatcgccgtcctcggtgactacaaccggcaaaacaaaagcctcgagcaggtgaagacg
ttcatcgaggagatcgagtcgatcgccagccctcccaagggcgaccacttcttcaacgtg
tccgacgaggtggccctgctgaccatcgtggacgctctcgaacagcgcatcttcgcgctg
gaaggtacgtcagacaaaaacacatctcctcttcgaatggagtattcccaggctgggttc
agtgcccacgcgtctaaagaggccttgatgctcggggcggtgggagccttcgaatggaac
ggcacggtggtcatgcagcaagatggggtcaccgtggagcccgacaaggccaccttccac
aaccccctggaggaaagatacgagggcatggcaggctatgtgggttacgacgtgcaatca
gcctcaacgcccgacggcatcctctacatcaccggtgccccgcgatacaaccacaccggc
cgcgtgaccatctaccgcttcgacggacaaaacatcaccgtcacacaaaccctgaaggga
cagcagatcggttcctactttggcagcgtgctgcagacggtggatgtggacatggactcc
tacacagacctgctcctggtcgggtcccccatgtacatgggctccgagagggacgagcaa
ggtcaggtgtacgtcttcaaactgaacaaggacggcaagtttgagccggagatgaccctg
aagcccgagccccaggcctgcgccaacaacatcgccatcaagaacgagccctgcggcgcc
cgcttcggcacggccatagccgccatcccagacctcaacctggacggctgggcggacgtg
gtgatcggctcgccgctggagaacgaccacagaggggcggtgtacatctaccatggcaac
aagcagaagactctcaaagagaagtatgtgcagcgcatcgctgctggaggggatggtgaa
aaagtgaagttttttggtcagtccatccacggaatcatggatttgaatgaagatggcatc
attgacgtcaccatcggaggtctgggtggagcatctctttactggtga

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