Clupea harengus (Atlantic herring): 116222854
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Entry
116222854 CDS
T09045
Name
(RefSeq) vimentin-like
KO
K07606
vimentin
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
116222854
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
char03019
]
116222854
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
char04812
]
116222854
04147 Exosome [BR:
char04147
]
116222854
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Factors that have mRNA localization signals
116222854
Cytoskeleton proteins [BR:
char04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type III
116222854
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
116222854
Exosomal proteins of other cancer cells
116222854
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
FPP
DUF1664
DUF7491
DUF3450
Tropomyosin
MscS_porin
Gp58
WXG100
SlyX
ApoLp-III
Spc7
CENP-F_leu_zip
ATG16
DivIC
Prefoldin
Prominin
Baculo_PEP_C
FlaC_arch
Phage_GP20
Laminin_II
DUF4407
ATG17_like
PUMA_CC
Spike_torovirin
TSC22
BLOC1_2
DUF2730
Fez1
Motif
Other DBs
NCBI-GeneID:
116222854
NCBI-ProteinID:
XP_042565376
UniProt:
A0A8M1KMU0
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Position
12:complement(2700335..2703265)
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AA seq
392 aa
AA seq
DB search
MRGSSHSQKSLSVSNSSSVRVQSPSPSRCKGSSYSRGRNGYQGGVSAVEVGTEIHQQHAN
EKEEMHEVNVRFAGYIGKVQALELRNAQLQAELAALQGRFKGGPGGLGEEYELKFKEMRD
LIEALTAQKGAADIERGYIKEEIDVWRLKLEEEMALKEAAEMILLEFRQDVDNATLQKAD
LERCVEQLLAEIELLKKLHDEEVAYLMQQIEDSKVTVELDSDRPDLAAYLRNMRAEIEAV
AARNVQEAEKWYKGKFDTLKQTAGKHEDQMKTMKDEITTFHNQVTELQNQIDGLRASNSA
LEQQLEDMEANHQDKVAGLEDIIDQLENQLCETKMEMSKYMQDYQELLHIKLKLDAEIAT
YRKLLESEEKRLGISTEGKAPILNYIQHYCLA
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgagaggctcctcacactcccagaagtccctatcggtgagcaactccagcagtgtgcgg
gtgcaaagtccatctccttcccgctgtaagggatcctcctacagccgcggtcgtaatggg
taccagggtggtgtctctgctgttgaggttggcacagagatccaccagcagcatgcaaac
gagaaggaggaaatgcatgaagtgaatgtacgctttgccggttacattgggaaggtgcag
gccctggaactgaggaatgcccagctgcaggcagagctggccgcactgcagggccgcttc
aagggaggtcctggtgggctcggagaagagtatgagctcaagttcaaggagatgagggat
ctgattgaggccctgactgcacaaaagggcgcagctgacattgagaggggttacatcaag
gaggagatagacgtgtggaggctcaaactggaggaggagatggccctcaaagaggcagct
gagatgatcctgctagagttccgtcaggatgtggataatgccacgctgcagaaagccgac
ctggagaggtgtgtggaacagctgctggccgagattgagttattgaagaagctgcatgat
gaagaggtggcttatctcatgcagcagattgaggattccaaggtcactgtggagctggac
tcagaccggcctgacctggcggcctacctgcgcaacatgcgtgctgagattgaggcagtg
gctgctcgcaatgtccaggaggcagagaagtggtacaagggcaaattcgacacactgaaa
caaacagccggcaaacatgaggaccagatgaagaccatgaaggacgagatcaccaccttc
cacaatcaagtgactgaactgcagaatcagattgatggcctgagagccagtaattctgct
ctggaacagcagctggaagacatggaggcaaatcaccaagacaaggtggcaggactggag
gacatcattgatcaactggagaaccagctctgtgagaccaagatggagatgagcaaatac
atgcaggactatcaagagctgctacacatcaagctgaagctcgatgctgagatcgccacc
tacaggaagctgctggaaagcgaagagaagagactgggaatctctacagaaggtaaggca
cccatacttaactacatccaacattactgtttggcatag
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