Clupea harengus (Atlantic herring): 116223342
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Entry
116223342 CDS
T09045
Name
(RefSeq) TBC1 domain family member 8-like
KO
K19951
TBC1 domain family member 8/9
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
116223342
Membrane trafficking [BR:
char04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
116223342
Endosome - Golgi transport
Rab GTPases and associated proteins
116223342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GRAM
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
116223342
NCBI-ProteinID:
XP_031435493
UniProt:
A0A6P8G7U0
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Position
2:950986..962846
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AA seq
589 aa
AA seq
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MLVGALDTVLDSNARVTPFRIVLQAPGSQVSWVIASGASLEEVKTHWCWLEVNLLDSLSV
FENKEDITSFVNGKIKGLIADESGGQQDPEGYREAVVRLEQRFGLPPREKLIARLTCCLW
KTHVPRQGWMYLTHNHMAFYSYLLGKEVKLLLPWAEVTGVERVCVGRVTDVLRVRTRTRQ
RDFSMFLSMDDAMATITQLTDLALRRVLPTAGLRTPHTLIHTALTKRALEDHALTQDVLS
LFGLPRTESVCEVRVCALWTPHLRSHTHGTLYATDSYLCFSSREPGVCSLIIPLSEVLSV
EKAETSSVLPDPVIVSVRGRRAFQMVGVCDRDTLLEAVTDRLRMLRWKHAIYKGQHSQHT
PLISPTPYYTFCYDTDGEADKSQRHVISTRPLISLNQSRMPKHKTAAERRKEALWEERFE
EFGRGTHMFRTACLHKLVAMGIPESLRGDLWLTLSDASSELAAHPGYYAQLVERSLGEVT
VATDEIERDLHRSLPEHPAFQSPFGIDALRRVLRAYAHHNTHIGYCQSMNILASVLLLYA
KEEEAFWLLATVCERMLPDYFNRQVIGVCVCVCVCVCNGSIKGLADLWI
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcggggccctggatactgtgttggattctaatgcacgtgtcactccattccgg
atcgttctacaggcgcccggctcacaagtcagctgggttattgccagtggggcctctctt
gaggaagttaaaacacactggtgttggttggaggtcaatctgctggactctctctctgtg
tttgagaacaaggaggacatcaccagcttcgtcaacggcaagatcaagggcctgatagct
gatgaatctggcggacagcaggaccctgagggctaccgtgaggcggtggtgcgtctggag
cagcgcttcggtctccccccgagagagaagctcatcgctcggctcacgtgctgcctctgg
aagactcacgtcccccgccagggctggatgtacctcacacacaaccacatggccttctac
tcatacctgctgggcaaggaagtgaagctgttgttgccgtgggcggaggtgacgggggtg
gagcgcgtgtgtgtcggccgggtaacggatgtgttgcgcgtgcgcaccagaacacgccag
cgagacttctccatgtttctgagcatggacgacgccatggcaaccatcactcaactcact
gacctcgccctgcgcagggtcttacccaccgcaggactgaggacgccacacacactcata
cacacagcactcacaaagagggcactggaggaccacgccctcactcaggatgtgttgtcc
ctgtttggcctgccgcggactgagagtgtgtgtgaggtgcgagtgtgtgccctgtggacc
ccacacctccgctctcacacacacggaactctctacgccacagacagctacctctgcttc
agcagccgagagccaggagtgtgttctctcatcatccctctgtctgaggtgttgtcggtg
gagaaggcggagacgtcgagtgtgttgccagacccggtgattgtgagcgtccgcggtcgg
cgtgcgtttcagatggtgggtgtgtgtgaccgcgacacactcctggaggccgtgaccgac
agactgcgcatgctacgctggaagcacgccatttataaaggacaacactcgcaacacaca
ccactgatctccccgaccccctactacacgttttgttatgacacggatggagaggcagac
aaatcccagagacacgtcatcagtacccgccccctcatctctctcaaccaatcacgtatg
ccaaagcacaagaccgctgctgagcgtcgtaaggaggccttgtgggaggagcgctttgag
gagtttggacgcggcacacacatgttccgcaccgcctgcctacacaagctggttgccatg
gggatccccgagtcgctacggggagacttgtggctcacgctctcagacgcgagctcggag
ctggcggcccaccccggctactacgcgcagctggtggagcgctcgctgggcgaggtcacc
gtggcaacggacgagatcgagcgcgacctgcatcgctcccttccggaacaccccgccttc
cagagcccgtttggcatcgacgcgctccggagagttctgagagcctacgcacaccacaac
acacacatcggatactgccagtctatgaacatcctggcctctgtgctgctgctctacgcc
aaagaggaggaggccttctggctcctggccaccgtgtgtgagaggatgctgcccgactac
ttcaaccgccaagtcataggtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtaatgggtct
atcaagggactggccgatctgtggatttag
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