Clupea harengus (Atlantic herring): 116223598
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Entry
116223598 CDS
T09045
Name
(RefSeq) LOW QUALITY PROTEIN: sodium/bile acid cotransporter-like
KO
K14341
solute carrier family 10 (sodium/bile acid cotransporter), member 1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03272
Virion - Hepatitis viruses
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
116223598
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
char02000
]
116223598
Transporters [BR:
char02000
]
Solute carrier family (SLC)
SLC10: Sodium bile salt cotransporter
116223598
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Gene cluster
GFIT
Motif
Pfam:
SBF
Motif
Other DBs
NCBI-GeneID:
116223598
NCBI-ProteinID:
XP_031436760
UniProt:
A0A6P8GPM4
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Position
14:3975395..3980509
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AA seq
313 aa
AA seq
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FSPAMDMAISAITIIILFITMVSLGCTMEIAKIRAHILRPKGVAIAVVAQFGIMPLTAFS
LAKVFQLAPIEAVTVLICGCCPGGNLSNLFALALQGDMNLSIVMTTCSTVLALAMMPTLL
YLYCQGFDLENAVPYTGILIALAMTLVPCGVGIAINHWIPGWSKMIIKIGLSILLIASVA
IGVMSGITIGGSVWVVLSPQLMAVACLMPLTGFLLGFVMSSLCKLNGQCRRTIAVETGCQ
NIQLCSTILKVAFLPEVIGPLYLFPLLYIIFQAGEALLLVLLYRCYQMLRPPAEEPTYWT
VNSKVEAVKVPTC
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
ttctcccccgccatggacatggccattagcgccatcaccatcatcatcctcttcatcacc
atggtctcgctgggctgcaccatggagatcgccaagatcagggctcacatcctgcgcccc
aaaggagtggccatcgccgtggtggcgcagtttggcatcatgccactgaccgctttcagc
ctggcaaaggtcttccagctggcccccatcgaggccgtcaccgtgctcatctgcggatgc
tgcccggggggaaacctctcaaacctttttgccctggccttgcagggtgacatgaacctc
agcatcgtgatgaccacatgctcaacggtcttggctctggccatgatgcccactctactg
tacctgtactgccagggctttgacctggagaacgccgtgccctacactggcatcctcatc
gccctcgccatgaccctagtgccctgtggggtgggcatcgccatcaaccactggatccct
ggctggtctaaaatgattattaagattggcctcagcatcctcctcatcgcctccgtggcc
atcggcgtcatgtcaggcatcaccatcgggggcagcgtgtgggtggtgctctctcctcag
ctcatggccgtggcctgcctcatgcctctcactggcttcctcctgggcttcgtcatgtcc
tcgctctgcaaactcaacggacagtgtcgcaggactattgcggttgagaccggctgccag
aacatccagctgtgctccaccatcttgaaagtggcattcctccccgaagtgatcggaccg
ctctacctctttcctctgctctacatcatcttccaggccggggaggctctcctcctcgtc
ttgctctacagatgctatcaaatgctcagaccaccagcggaggagccgacgtactggaca
gtaaacagtaaagttgaagctgtgaaagttcctacttgctga
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