Clupea harengus (Atlantic herring): 116223615
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Entry
116223615 CDS
T09045
Name
(RefSeq) sterile alpha motif domain-containing protein 9-like
KO
K23949
sterile alpha motif domain-contaning protein 9
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
116223615
Membrane trafficking [BR:
char04131
]
Endosome - Lysosome transport
Others
Others
116223615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_1
SAM_2
SAM_KIDINS220
TPR_19
Motif
Other DBs
NCBI-GeneID:
116223615
NCBI-ProteinID:
XP_031436818
UniProt:
A0A6P8GC59
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All DBs
Position
14:complement(28641266..28645941)
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AA seq
1530 aa
AA seq
DB search
MEFDNVPLEKWTEALVSSWLRSIGIKEQYVTKLNEEEVNGQVLLKLTEDFLERVIHMKAG
PALLIIKKRNELVESLQRVQKVHQNQDNVKREDGDTNSPPQTTGKTSKAKETDTQTLSGL
TSKRDCKPRPLGKDGIDFTYIKHNVLQPESGVIDLIAPCHEYKSFAIAATLDRPRLQAKF
AKEVLKFGTGCMNIRTNGTIHFGVMDSRDDAGYVHGEIIGVPVPEKDIYVDALDHIERSF
SSADGEHVRQCIRPPQFIEVIEMSSSEKRYVVEVDIVPAISIVKNRWYPVRLPNFKEKSN
KIEHEKETIYRRVGSKTEPVSDSNEFYQRVRDRDAQREEAEQSCFDSCPDVSQDLGRKLT
MLVTSGKKFIEKEKWYILITNKFEKFDLSSIDFLLNMKIFAVFDFDADSKVSGLCSEYLK
HHAANFHFMQNYQIPTGMSISEFESHLHLFEQTSWIFCNGRNDFKGNEKQCDEMTWIKTK
MTLLRECVSVICKQILPKDTFSVVFLLTSPVEKPLLHTFYEFFTDMEGHEDIICISESED
NFQKWQSFAEGSCGAEMVNRSSIVGMKMSHVNATLQRIQPMTSRALKHLPVYVKGECNLE
TREEERIYSLEILSVNHCDETSSDFVEEQRESIEREFYHGGKVNWLNLWLADKKHVGEVI
QRDAYQEISDLINDNLKRNVDQLPVSCFNIYHHPGSGGSTVARQVLWSSRKVLRCSVVKP
SYSAATVSEHAFHLREYEEKNPQKCLPVLLLLEDCDKEYQDDLKKELELAVNTKKIARGT
LCFILLSCRRSHNPERMCRESPLENVAITHKLSDQEKTLFAGKRKTLEQKYQPEFILTFV
LMSEEFDHQMIVEYVQKFVTHLLQGIDHASVVTRLIRYVALLNTYVQDSFISQSHCEALL
ALTIHMDRFRQNAFERSLSEPAKLVFIHLSDVRTHIQSVRIIHPLVAKEILQQLLGDQLQ
SQLALDLLRENVLFENRFGKDDYVKFLRALFMRRSRISKGDESDSSFSPLIDHVRENESP
KHAIELLTEAYKRFNKDAFFAQQLARLNYSHDQFEDAKHWAEIAASKMPTNSYILDTRGQ
VYRRWFTAKCKALDKVTKTPENTADSIDMALKALECFQLCEKAAIADVETMNNSGFFSAV
EVGCSLLKLLFSLQIFSNKNYSSSECLKYLTTDYIPEPVMKPWEHFHVKLKNLQSSMRET
LEWISEDLSYFQTDLSTDEEETTENCETKINHPKIWLVTKFSVYGRYFSDASLETITKQC
QSNPASLTPFMKRMLICRLGGGNITTIFSLVSDQKDKNQVKVLEDIISLYPRNPLRARLD
QMDLSNYIATHIALSCLSPQSPKLATLKDLQKLSQQFPNEKRDCVPNALFLLTLLFWPEE
HDTEDEKDRKYGIVLSAVEVLKRSYWTKMKDIPQTKKRIFTHFFLGNGNGFDKFVHRTKV
EKITKLLSVSDNRMKWVRGEVWTKPEITELCKRATGWTEDGTVYLEGPRERKLKIPALYT
GSVPYGNENVTFYLGFTFRGPVAYNITAML
NT seq
4593 nt
NT seq
+upstream
nt +downstream
nt
atggaatttgacaatgttccacttgaaaaatggacagaggctttggtaagttcctggctg
aggtccattggcatcaaagaacaatatgtgaccaaactcaacgaagaggaagtgaatggg
caggttcttctgaaattaacggaggactttttggaaagagtaattcatatgaaagctgga
ccagctctgctgatcatcaagaagaggaatgagcttgttgaatctcttcagagagtacaa
aaagtccaccaaaatcaggacaatgtaaagagggaagacggtgatacaaacagtcctcca
cagacaacgggcaagacttcaaaggccaaggaaactgacacacagaccttgtctgggtta
acctcaaagagagactgtaagcctaggcccttaggcaaagatggtattgattttacatac
atcaagcacaatgtcctacagcctgaatctggggttatagatctgatcgctccctgtcat
gagtacaagtcatttgctattgcagcaacattagatcgcccaaggctacaggctaaattt
gccaaagaggttctcaaatttggtactggttgcatgaacatacgaacaaatggcaccata
cattttggtgtaatggacagtagggatgatgctggctatgtgcatggggagataattggt
gttcctgtgccggaaaaagacatctatgttgatgctcttgatcatatagagagatccttt
tcctctgctgatggagagcatgtgagacagtgcatacggccacctcagtttattgaggtc
attgagatgagcagctcagagaagaggtatgttgtggaagttgacattgttcctgcaata
agcattgtgaagaacagatggtaccctgttcgtcttcctaactttaaagagaaatccaac
aagattgagcatgaaaaggaaaccatctaccgcagggtgggctcaaaaacagaaccagtt
agcgattccaatgagttttaccaaagggtgcgtgacagggatgcccagagagaggaggct
gaacagtcatgttttgacagctgtccagacgtcagccaagaccttggaagaaaactaaca
atgcttgtaaccagtggcaagaaattcattgagaaggaaaagtggtacattctcatcaca
aacaagtttgaaaaattcgacctaagcagcattgacttccttttgaatatgaagatcttc
gctgtctttgactttgatgcagactctaaagtgtcaggattgtgcagtgagtacttgaag
catcatgctgcaaactttcacttcatgcaaaactaccaaattcccactggaatgagcatc
agtgaatttgagagccatctgcatttgtttgaacaaaccagttggatattttgcaatgga
cgcaatgacttcaaaggaaatgagaaacagtgtgatgaaatgacatggatcaaaactaaa
atgactctcctccgagaatgtgtgtcagtgatttgtaaacagatactgccaaaagacacc
ttctcggtggtgttcctgctgacatcgcctgttgaaaaacctctacttcacaccttctat
gagttctttactgacatggaaggtcatgaggacatcatatgcatctcagaatcagaagat
aatttccagaagtggcagagctttgcagaggggtcttgtggtgcggaaatggttaaccgc
tcaagtattgttggaatgaaaatgagtcatgtcaatgcgaccctacaacgcatccagccg
atgacttcacgcgccttaaaacacttgccagtctatgtgaaaggagagtgcaaccttgag
actcgtgaggaagaaaggatatattccctcgaaatcctaagtgtcaaccactgtgatgaa
accagctctgactttgttgaagaacagagagaaagcattgagagggagttttatcatgga
gggaaagttaattggttgaatctttggcttgctgacaaaaagcatgttggggaggtcatc
cagagggatgcttaccaggaaatttctgacctaatcaatgacaacctcaaaaggaatgtt
gaccagctgcctgtcagttgcttcaatatatatcatcatcctggcagtggtggtagtaca
gtggcaaggcaagttctttggagcagtcgaaaagtcctacgatgttctgttgtgaaacca
tcatactctgcggccacagtgtcagagcatgcttttcatcttcgagaatacgaggaaaag
aacccccagaaatgccttccagttctcttgcttttggaagactgtgacaaagaataccaa
gacgatttaaagaaagaactggaattagcagtcaacaccaagaaaatagcacgtggaaca
ctgtgtttcattttgttgagttgcaggcggtcccacaacccagagagaatgtgtagagag
tcccccttggagaatgttgccattacgcacaaactctcagatcaggaaaagacacttttt
gctgggaaacgaaagacacttgagcaaaagtaccagccagagttcatcttgacctttgtt
ttgatgagtgaagaatttgatcatcagatgattgttgaatatgttcaaaagtttgtcact
catttgcttcaagggattgaccatgcatcggtggtgactcggctcattcgctatgtggca
ctgctgaatacctatgtacaggactccttcatctctcagtctcactgtgaggccctgctt
gccctcacaatccacatggacagatttcgtcagaatgccttcgagagatcactgagtgaa
ccggcaaaattggtcttcatacacctcagtgatgtcaggacacacatacaatcagtccga
ataattcaccccctggttgccaaggaaatactgcaacagctcttaggtgatcagctgcaa
agccaactggcattggatctacttcgcgaaaatgtgctgtttgagaacaggtttggcaaa
gatgattacgtgaagtttctgcgagccctgttcatgaggcgtagcagaataagcaaaggt
gatgaatcagacagttccttctccccactcattgatcatgtgcgagagaatgaaagtcct
aagcatgcaattgagcttcttacagaggcgtacaagcgtttcaacaaagatgcttttttt
gctcagcaacttgcccgtctcaattatagtcatgatcaatttgaagatgcaaaacactgg
gcagaaatagcagcatctaaaatgcctaccaactcctatatactagacacacgaggccag
gtttacaggagatggttcacagcaaaatgcaaggcacttgacaaagtaactaaaacacct
gaaaatactgcagattccattgatatggctctgaaagcattggaatgctttcagctgtgt
gaaaaggcagcaatcgcagatgttgaaaccatgaacaactcaggctttttttctgcagtt
gaggttggatgcagcctgctaaagctcctgttttccctacagatcttctctaacaagaac
tacagcagttcagagtgcctgaaatacctgaccactgactacattcctgagccagttatg
aaaccatgggaacattttcatgtcaaattgaaaaaccttcagtcctcaatgcgtgaaaca
ttggagtggatatcagaggacctgagctactttcagactgatttgagcactgatgaggaa
gagacaacagagaattgtgagacgaaaataaaccaccccaagatttggctggtaactaag
ttctctgtgtatggaaggtacttctctgatgcatctctcgaaaccatcacaaaacagtgt
cagtcaaacccagccagtttgactccctttatgaagcgtatgctgatttgtcgccttggt
gggggaaacatcaccacaatcttctcacttgtaagtgaccagaaggataaaaaccaagta
aaagtacttgaggacatcatctcattgtacccaaggaatccactgagagcaaggctggat
cagatggatctttccaactacatagcaactcatattgctctaagttgcctctcacctcag
tctccaaaactggccactctcaaggatcttcagaaactaagccaacagtttcccaatgag
aagcgtgactgcgtgcccaatgctctcttccttcttacattgcttttctggccagaggaa
catgacactgaggatgagaaggaccgcaagtatggtatagttctctcagcggtggaggtc
cttaagcgcagttactggacaaaaatgaaggatattccacagacaaagaagaggatattc
actcattttttcttggggaatggaaatggctttgataagtttgtccacagaactaaagtg
gaaaagatcacaaaactcctgagcgtctcagataatagaatgaagtgggttcgtggggag
gtgtggacgaagccagagattacagagctgtgcaaacgtgcaactggctggacagaggac
gggactgtgtaccttgaaggtccacgggagcggaagctcaaaatccctgctctatacaca
ggttcagtgccttatggaaatgaaaacgtcaccttctacttgggcttcacatttagagga
ccagtggcctacaacattacagcaatgttgtag
DBGET
integrated database retrieval system
