Clupea harengus (Atlantic herring): 116223625
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Entry
116223625 CDS
T09045
Name
(RefSeq) claudin-20
KO
K06087
claudin
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03272
Virion - Hepatitis viruses
char04382
Cornified envelope formation
char04514
Cell adhesion molecules
char04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03272 Virion - Hepatitis viruses
116223625
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
116223625
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
116223625
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
116223625
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
char03037
]
116223625
04147 Exosome [BR:
char04147
]
116223625
04515 Cell adhesion molecules [BR:
char04515
]
116223625
Cilium and associated proteins [BR:
char03037
]
Other cilia and associated proteins
Stereociliary proteins
116223625
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of ovarian cancer cells
116223625
Exosomal proteins of colorectal cancer cells
116223625
Cell adhesion molecules [BR:
char04515
]
Immunoglobulin superfamily
L1 family
116223625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PMP22_Claudin
Claudin_2
Clc-like
TMEM_230_134
Motif
Other DBs
NCBI-GeneID:
116223625
NCBI-ProteinID:
XP_031436868
Ensembl:
ENSCHAG00000008645
UniProt:
A0A6P8GHP9
LinkDB
All DBs
Position
14:complement(27285338..27292431)
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AA seq
251 aa
AA seq
DB search
MLPSGDGPGMASPGMQIIGFVLALLGIMGATLATMLPNWKVSADVASNIISAITQMQGLW
MDCTWYSTGVFSCTLKYSVLALPAYLQTARTTMVLSCVLAAFGLCLASLGLKCTRWGGGR
RSKQHSAMASGGCFLMSGLLCLVPACWFTDEVIKNFLDSNVPPNNKFEPGGALYVAFVSA
GFLLAGGSIFCATCSGKRQGPRDLILLPPDKLLLQQQQQLLHQQQQDQLQHQYCSLSPMD
NKTGYSLQDYV
NT seq
756 nt
NT seq
+upstream
nt +downstream
nt
atgctgccctctggggacggcccggggatggcctcgcccggcatgcagattatcggcttc
gtgctggcgctgctgggcatcatgggggcaacactggccacgatgctgcccaactggaag
gtgagcgccgacgtggcctccaacatcatctccgccatcacgcagatgcagggcctgtgg
atggactgcacctggtacagcacgggcgtcttcagctgcacgctcaagtactcggtgttg
gcgctgcccgcctacctgcagacggcgcgcaccaccatggtgctgtcgtgcgtgctggcc
gcgtttggcctttgcctggcctccctgggactcaagtgcacgcgctgggggggcggccgg
cgctctaagcagcactcggccatggccagcggcggctgcttcctgatgtccggcctgctc
tgcctggtgcctgcctgctggttcaccgacgaggtcataaagaactttctggactccaac
gtgccgcccaacaacaagttcgagccgggcggcgctctgtacgtggccttcgtgtcggcc
ggcttcctgctggcgggcggctccatcttctgtgccacctgctcgggcaagcggcagggg
ccccgcgacctcatcctgctgccccccgacaagctgctcctgcagcagcaacagcagctc
ctccatcagcagcagcaagaccagctccagcaccagtactgctccctctcccccatggac
aacaaaacgggctacagcctgcaggactacgtgtga
DBGET
integrated database retrieval system