KEGG   Clupea harengus (Atlantic herring): 116223808
Entry
116223808         CDS       T09045                                 
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM35-like
  KO
K12012  tripartite motif-containing protein 35
Organism
char  Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:char00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:char04121]
    116223808
Ubiquitin system [BR:char04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    116223808
SSDB
Motif
Pfam: zf-B_box zf-RING_UBOX zf-C3HC4 zf-C3HC4_3 zf-C3HC4_2 zf-C3HC4_4 U-box zf-RING_2 zf-RING_5 zf-Nse zf-RING_6 Sina_RING Prok-RING_4 zf-RING_4 End3 zf-C3HC4_5
Other DBs
NCBI-GeneID: 116223808
NCBI-ProteinID: XP_042565644
Ensembl: ENSCHAG00000021106
UniProt: A0A8M1KVL7
LinkDB
Position
2:complement(8038680..8041610)
AA seq 247 aa
MASKSFSQEDFSCPVCFEIFKNPVILTCSHSMCKVCLQKFWETKGSRECPVCRRKSSKSD
LPLNRHLKNLCETFQQERSQRDPFCSLHRSELKLFCEDDKQLVCVVCRDSKLHKNHTFSP
ISEAAFEHKQEELKIKLEPLQKKLDNFKQVKTTSDKTAQHIRVQAQHTERKIKKEFEKLH
QFLRDEEAARLAALREEEEQKSQMMKEKIEKMSREISSLSDTTRAIEEEMGADDITFLQV
GPMLYLC
NT seq 744 nt   +upstreamnt  +downstreamnt
atggcgtccaagtctttttcacaagaggatttttcctgtcctgtttgttttgaaatcttc
aagaatcccgttattctaacatgtagtcacagtatgtgtaaagtctgcttacagaagttc
tgggagactaaaggatccagggaatgtccagtctgcaggagaaaatcctctaaaagtgac
cttccacttaaccgccatctaaagaatctgtgtgagactttccaacaggagagaagtcag
agagatcctttctgcagtctgcaccgttctgaactcaagcttttctgtgaagatgacaaa
cagcttgtgtgtgtggtgtgtcgagactcaaaactccacaagaaccacacattcagtcct
atcagtgaagcagcatttgagcataagcaggaagaactgaagatcaaactggagccctta
cagaagaagctggacaactttaaacaagttaaaacaaccagtgataaaactgcccaacac
ataagagtccaggcccaacacacagagaggaagatcaagaaggagtttgaaaagcttcac
cagtttctacgagatgaagaggcagccaggttagctgcactgagggaggaagaggagcag
aagagtcagatgatgaaggagaaaattgagaagatgagcagagagatctcatctctttca
gacacaaccagagccatagaggaggagatgggagctgatgacatcacattcctgcaggta
gggcccatgctttatctttgttag

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