Clupea harengus (Atlantic herring): 116223808
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Entry
116223808 CDS
T09045
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM35-like
KO
K12012
tripartite motif-containing protein 35
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
116223808
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
116223808
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-C3HC4_4
U-box
zf-RING_2
zf-RING_5
zf-Nse
zf-RING_6
Sina_RING
Prok-RING_4
zf-RING_4
End3
zf-C3HC4_5
Motif
Other DBs
NCBI-GeneID:
116223808
NCBI-ProteinID:
XP_042565644
Ensembl:
ENSCHAG00000021106
UniProt:
A0A8M1KVL7
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Position
2:complement(8038680..8041610)
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AA seq
247 aa
AA seq
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MASKSFSQEDFSCPVCFEIFKNPVILTCSHSMCKVCLQKFWETKGSRECPVCRRKSSKSD
LPLNRHLKNLCETFQQERSQRDPFCSLHRSELKLFCEDDKQLVCVVCRDSKLHKNHTFSP
ISEAAFEHKQEELKIKLEPLQKKLDNFKQVKTTSDKTAQHIRVQAQHTERKIKKEFEKLH
QFLRDEEAARLAALREEEEQKSQMMKEKIEKMSREISSLSDTTRAIEEEMGADDITFLQV
GPMLYLC
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccaagtctttttcacaagaggatttttcctgtcctgtttgttttgaaatcttc
aagaatcccgttattctaacatgtagtcacagtatgtgtaaagtctgcttacagaagttc
tgggagactaaaggatccagggaatgtccagtctgcaggagaaaatcctctaaaagtgac
cttccacttaaccgccatctaaagaatctgtgtgagactttccaacaggagagaagtcag
agagatcctttctgcagtctgcaccgttctgaactcaagcttttctgtgaagatgacaaa
cagcttgtgtgtgtggtgtgtcgagactcaaaactccacaagaaccacacattcagtcct
atcagtgaagcagcatttgagcataagcaggaagaactgaagatcaaactggagccctta
cagaagaagctggacaactttaaacaagttaaaacaaccagtgataaaactgcccaacac
ataagagtccaggcccaacacacagagaggaagatcaagaaggagtttgaaaagcttcac
cagtttctacgagatgaagaggcagccaggttagctgcactgagggaggaagaggagcag
aagagtcagatgatgaaggagaaaattgagaagatgagcagagagatctcatctctttca
gacacaaccagagccatagaggaggagatgggagctgatgacatcacattcctgcaggta
gggcccatgctttatctttgttag
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integrated database retrieval system