Clupea harengus (Atlantic herring): 116224062
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Entry
116224062 CDS
T09045
Name
(RefSeq) solute carrier organic anion transporter family member 1C1-like
KO
K08747
solute carrier organic anion transporter family, member 1C
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
116224062
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
char02000
]
116224062
Transporters [BR:
char02000
]
Solute carrier family (SLC)
SLC21/ASLCO: Organic anion transporter
116224062
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OATP
MFS_1
Kazal_2
Kazal_1
DUF6944
Phage_holin_3_6
Motif
Other DBs
NCBI-GeneID:
116224062
NCBI-ProteinID:
XP_031438511
Ensembl:
ENSCHAG00000019966
UniProt:
A0A6P8GSS3
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Position
16:9029236..9046846
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AA seq
680 aa
AA seq
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MSVATKEPRQPCCSQLKLFLMALSFVYFGKAFGGAYMKSSVTQIERRFDIPSSIVGVIDG
GFEVGNLLVITFVSYFGAKMHRPRLIGIGCLIMAAGAFCTALPHFLQGPYKYETTISHST
EGNSTQSMLQCLSSAEQAQEDEPPTAQNQAECEKAAGSSMWIYVFLGNMLRGIGETPVMP
LGVSYLDDFAREENTAFYLACIQTVGIMGPVFGYLLGSYCAKIYVDIGVVDLDSVTINHK
DSRWVGAWWMGFVITGAVMLLAGIPFWFLPKSLPKQTKKQKKTADGAAEDQGTFLPHEGN
KEVATAEKEPPINMAALVKDFLPSLRRLFSNSVYNLIICTSLVAVNGFIGMITFKPKFME
QTYGQSPSKAIFLIGVFNLPAVALGIITGGFVMKRFKLTVIGAARIALSASFISFCLMVS
QYFLQCDNAQVAGLTVSYQGVPELSYQQSNLLSQCNSGCSCSIKHWDPVCAHNGITYASP
CLAGCQTSTGVGKEMIFHNCTCVEELVMPPANLSATLGQCSRKGDCDRMFMWYMGVSVVG
AFVSACGATPGYIVLLRSIAPDLKALALGMQTLIVRTLGGIPPPIYFGALIDQTCLKWGS
KRCGGQGACRLYDTFAFRARFLGMIYGLYALSYLLWGVLYRTLVKRQRKLALKTQAKGQG
ANGCRDEGKSKEELERETTI
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtggcaaccaaagaaccccgccagccctgctgctcgcagctcaagcttttcctg
atggccttgtcgttcgtctactttggcaaagccttcgggggtgcctatatgaagagctcg
gtcactcagatcgagagacgcttcgacatacccagctctattgtcggggtcattgatggc
ggctttgaagtcggcaacctgctggtcatcacctttgtgagttactttggggcgaagatg
caccggccgcggctcattggaataggctgcctcatcatggccgccggagctttctgtacc
gccctgccacacttcctccagggaccgtataaatatgagaccaccatctcccattctaca
gagggaaactccacccagagcatgctgcagtgtctcagcagtgcagaacaggctcaggag
gatgagccacccacagcacagaaccaagcagagtgtgagaaagcggctggctcgtccatg
tggatctacgtgtttctggggaacatgctgcggggcatcggagagacaccagtcatgccc
ctgggggtgtcctacctggatgactttgcccgtgaggagaacacggccttctacttggcc
tgtatacagacagttggaatcatgggcccagtgtttggctaccttctggggtcttactgt
gcaaagatctatgtggatatcggtgttgtagacttagactcggtgaccatcaaccataag
gactcgcgctgggtgggggcctggtggatgggcttcgtcatcactggcgccgtcatgctc
ctcgccggcatccccttctggttcctgcccaaatccctgccgaagcagacgaagaagcag
aaaaagacggctgacggggcagccgaggaccagggcaccttcctgccccacgagggcaac
aaggaggtggccactgctgagaaagaaccacccattaacatggcagcactggttaaagac
tttctgccctcactgcgcaggctgttcagcaactctgtgtacaacctcatcatctgcacc
tcgctcgtggcggttaacggcttcatcggcatgatcaccttcaagcccaagttcatggag
cagacctacggacagtccccctcaaaggccatcttcctcataggcgtgtttaacctacct
gcagtggctctgggcatcatcaccggtggcttcgtgatgaagcggttcaaactgaccgtg
atcggagcggcacgtatcgccctcagcgcctcattcatctctttctgcctgatggtgtca
cagtacttcctgcagtgtgacaatgcccaggtcgccgggctcaccgtcagctaccagggt
gttcctgagttgtcgtatcagcagagtaacctgctgtctcagtgtaatagcggctgctct
tgctccattaagcactgggacccagtgtgcgctcacaacggcatcacctacgccagccca
tgcctggcagggtgccagacttcaaccggagtcggcaaagagatgatcttccacaactgc
acgtgtgtggaggagttggtgatgcccccagccaacttgtctgccaccctgggacagtgc
tcacgcaagggcgactgcgacagaatgttcatgtggtacatgggcgtgtctgtggtgggg
gcgttcgtgtcggcctgcggggctacacctggttacattgttctgcttagatccatagct
cctgatctaaaggctctggccttgggaatgcagacgctgatagtccggactctgggtggg
atccctccgcccatctacttcggggcgctgatagaccagacgtgtctgaagtgggggagc
aaacggtgtgggggtcagggggcgtgccgactctacgacacattcgccttcagagcacgt
ttcctgggcatgatctacgggctttatgcactgtcctacctgctgtggggtgtgctgtac
cgcactctggtcaagcggcagaggaagctggctctgaagacccaggccaaggggcagggg
gccaacggttgccgtgacgagggcaagagcaaagaggagctggagagggagaccaccatc
tga
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