Clupea harengus (Atlantic herring): 116224218
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Entry
116224218 CDS
T09045
Name
(RefSeq) transcription termination factor 1-like
KO
K15225
transcription termination factor 1
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
char03021
]
116224218
Transcription machinery [BR:
char03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
116224218
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
116224218
NCBI-ProteinID:
XP_031439301
UniProt:
A0A6P8GNM3
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Position
16:complement(1586731..1592157)
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AA seq
543 aa
AA seq
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MTEAELVFHKKKKKNKTKKQLLEAVPEPGNPPETTTTGVDSHKKHKHKKKKTKSEKDDCR
PVEGQCDTRERQDKKKRKHDAENVSVTQEAADAAAAQEREVKKKKKKKRRIEEPDRPGEN
SEAEAALTAVQTNLEPVPQTRVKRKAKVRKTHTQPAADTHSPTDARLHPDDVPKAPVLDI
DDAIRQEILEFLPHFTFCNTAHVKNVIRYDLPRFRVYKKQGIPLRTGWLTAAENKQLKQN
VKDFLAVSGIGSEFKLFRPQRFPDEMVTIRRLKRKFNFVRSLCAGIPRSWISISKRARNF
CNRENYLGRFTEDENKVLKELYSLHGSNWTTIGDKMGRSGSAVQSRFGLMSEVYGPWSEA
EFKVLLTCLHQQLLKRAEPGGEGGDGSAVIQKMDLYKKLPWRRVAKQIKTRSWMQCRDKW
MKYLMGKMKTGGKIHGRKNIEGQIQLIKAINEMAVEESSDIVWDDLTHLFGNTPPVYLQM
KFHQLKMTSIPDWNRKSFCDIIDFLYEKTLPKLEEDLKGCKDDDDEPAELRQSYKLSEIF
PNL
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggcagagctggtctttcataaaaagaagaaaaagaacaagaccaagaagcaa
cttttagaggcggtgccggagcccggcaatcctcctgagacaaccactacgggagtcgac
tctcataagaaacataaacacaaaaagaagaaaacaaagagtgagaaagatgactgtaga
cccgtcgagggccagtgtgacacaagagaaaggcaggacaaaaagaaaagaaaacacgat
gcagagaatgtaagtgtgacacaagaggctgcagatgctgctgctgctcaggagagagag
gtgaagaaaaagaaaaagaagaaaaggagaattgaagagccagaccgtcctggagagaac
tcagaagcagaggcggcactcacagcggtgcaaaccaaccttgaaccagtcccccagaca
cgagtgaagcgcaaggcgaaggtcagaaagacacacacacagcctgctgcagacacacac
tctcccacagacgcacggcttcacccagatgatgtgcctaaagcgcctgtgctggacatt
gacgatgccatccggcaggagatcctggaattcctgcctcactttacgttttgcaacacc
gcccatgtgaagaatgtcatcaggtacgacctgccccgcttcagggtatacaagaagcaa
gggatccctctgcgaacaggatggctcaccgcggccgagaacaagcagcttaaacagaac
gtgaaggacttcctggccgtttccgggatcggcagcgagttcaagctttttagaccccaa
cgcttcccagatgagatggttaccatccgaaggctgaagaggaagttcaacttcgtcagg
agtttatgcgctgggatccctcgttcctggatatctatatcgaaacgagccaggaacttc
tgcaacagggagaattacttggggaggtttacagaagatgagaacaaggtcttgaaggaa
ctgtattcgctgcatgggtcaaactggacgaccataggagacaagatgggccgcagtggt
tcagccgtgcagagtcgctttggcttgatgtctgaggtttatgggccatggtcagaggcc
gagtttaaggtcctcctgacgtgcttacaccagcagctgctgaagagggctgagcctgga
ggagagggcggcgacgggtctgcggtcatccagaaaatggacttgtataagaaactgccc
tggaggcgtgtggccaagcagatcaagactcgcagctggatgcagtgcagggataagtgg
atgaaatacctgatgggtaaaatgaagacaggtggaaagatccacgggaggaagaacata
gaggggcagatccagctgatcaaagcgatcaatgaaatggctgtggaggaatcttcagac
atcgtgtgggatgacctcactcatctctttggcaacaccccacctgtctacttacaaatg
aagttccaccagctgaagatgacctctataccagactggaacagaaagtctttctgtgac
atcattgatttcctgtatgagaagaccctgccaaagctggaggaggacctgaagggctgt
aaggatgatgatgatgagcccgcagagctgcgacagtcttacaagctgtcagagatcttc
cccaacctctga
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