Clupea harengus (Atlantic herring): 116224372
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Entry
116224372 CDS
T09045
Name
(RefSeq) transcription termination factor 1-like
KO
K15225
transcription termination factor 1
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
char03021
]
116224372
Transcription machinery [BR:
char03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
116224372
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
116224372
NCBI-ProteinID:
XP_031439609
Ensembl:
ENSCHAG00000023312
UniProt:
A0A6P8GKF7
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Position
17:complement(23772185..23783335)
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AA seq
538 aa
AA seq
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MTEADLDFHKKKKRNKKQLLEEVAEPGNPHETTTTGVDSQKKHKHKKKKTKSEKDDCRPV
EGQCDTREGQNKKKRKHDAENVSVTQEAADAAAAAAQEREVKKKKKKKGRIEEPDRAGEN
TEAEAALTAVQTNLEPVPQKRVKRKAKVRKTHTQPAADTHSPTDARLHPDDVLDVDEATR
QEILEFLPNFSFRNVVTVYGAINYDLPRYRVYKKQGIPVGTGRFTAAENKQLKQNVKDFL
AVSGIDSEFKLFRPTRFPDETVTIRSLKRKHNFLWCLCAGIPRSWMNILDRARRMCNREN
YKGRFTEDENKNLKELYKLHGSNWTTISDKIGRSCSAVQKRFNGMCENHGAWSEAELKVL
LTCLHQQLLKRAEPGGEGGDGSAVIQKMDLYKKLAWRRVAKQVQTRSWLHCKHKWMTYLM
GKMKTGGKIHGRKTIEGQIQLIKAINEMAVEEPGDIVWDDLTHLFGNTPPDYLQKKFYQL
KVTYIPDWNRKSLCDIIDFLYEKTLPKLEEDLKGCKDDDDEPAETRQSYKLSEIFPNL
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgacggaagcagatctggactttcataaaaagaagaagaggaacaagaagcaactttta
gaggaggtggcggagcccggcaatcctcacgagacaaccactacgggagtcgactctcaa
aagaaacataaacacaaaaagaagaaaacaaaaagtgagaaagatgactgtagacccgtc
gagggccagtgtgacacaagagaagggcaaaacaaaaagaaaagaaaacacgatgcagag
aacgtaagtgtgacacaagaggctgcagatgctgctgctgctgctgctcaggagagagag
gtgaagaaaaagaagaagaagaaagggagaattgaagagccagaccgtgctggagagaac
acagaagcagaggcggcactcacagcggtgcaaaccaaccttgaaccagtcccccagaaa
cgagtgaagcgcaaggcgaaggtcagaaagacacacacacagcctgctgcagacacacac
tctcccacagatgcacggcttcacccagatgatgtgctggacgttgacgaggccacccga
caggagatcctggagttcctgcctaacttctcgtttcgcaacgtcgtcacagtgtatggg
gccatcaattacgacctgccccgctacagggtatacaagaagcaagggatccctgtggga
acagggcggttcaccgcggccgagaacaagcagctgaaacagaacgtgaaggacttcctg
gccgtctccgggattgacagcgagttcaagcttttcagacccacacgcttcccagatgag
acggttaccatccgaagtctgaagaggaagcacaacttcctctggtgtttatgcgctggg
atccctcgttcctggatgaatatactcgaccgagccaggaggatgtgcaacagggagaat
tacaaggggaggtttacagaagatgagaacaagaacttgaaggaactgtataagctgcat
gggtcaaactggacgaccatatcagacaagatcggccgcagttgttcagccgtgcagaaa
cgctttaacgggatgtgtgagaatcatggggcatggtcagaggcagagttgaaggtcctc
ctgacgtgcttacaccagcagctgctgaagagggctgagcccggaggagagggcggcgac
gggtctgcggtcatccagaagatggacttgtataagaaactggcctggaggcgtgtggcc
aagcaggtccagactcgcagctggttgcactgcaagcacaagtggatgacttacctgatg
ggtaaaatgaagactggtggaaagatccacgggagaaagaccatagaggggcagatccag
ctgatcaaagcgatcaatgaaatggctgtggaggaacctggagacattgtctgggatgac
ctcactcatctctttggcaacaccccacctgactacttacaaaagaagttctaccagctg
aaggtgacttatataccagactggaacagaaagtctctctgtgacatcattgatttcctg
tatgagaagaccctgccaaagctggaggaggacctgaagggctgtaaggatgatgatgat
gagcccgcagagacgcgacagtcttacaagctgtcagagatcttccccaacctctga
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