Clupea harengus (Atlantic herring): 116224682
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Entry
116224682 CDS
T09045
Symbol
rpgrip1
Name
(RefSeq) X-linked retinitis pigmentosa GTPase regulator-interacting protein 1 isoform X1
KO
K16550
protein fantom
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
char01009
]
116224682 (rpgrip1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
char03037
]
116224682 (rpgrip1)
Protein phosphatases and associated proteins [BR:
char01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
116224682 (rpgrip1)
Cilium and associated proteins [BR:
char03037
]
Primary cilia and associated proteins
MKS complex
116224682 (rpgrip1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPGR1_C
C2-C2_1
Motif
Other DBs
NCBI-GeneID:
116224682
NCBI-ProteinID:
XP_031441095
Ensembl:
ENSCHAG00000025893
UniProt:
A0A6P8H1R4
LinkDB
All DBs
Position
18:complement(500653..515446)
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AA seq
783 aa
AA seq
DB search
MTSLQERLDSVTHVFDMSVEELSETLLQIKAFRLQQESQEGMRLLGSKGKGEDPYREMIN
LQASYAETVFELQKTRDLLLLQHRISADLQAELQTIIFRADTEKQEFQKKVSEKERMLKS
RMRQIITLQAQLRELVYSPKVYKRTAPTEYSWLGKDQENVFPVEDDNVVFQLQRGESLLE
VHLRGVTFTPLGLRLMGQAQAREYGMPTEVTTFCTYALLDFETHSTPLGSGVQPHYAFTS
RYALSVSDLGKLAGQGGMMTADLHQKLGGVLFVTCGRAQISLLDAMEYRGERISGAANIT
GKDGEILGVLELWVRLQPTTGPPKSVLERAADRQLERAADRQLDRASDRQLEGLTETRVT
QQPLHRREHIYEELHKSDLGTANELEVVLDRCIGLSARWPELLPDAYLTYQLFDLPPHSS
PIIHSSADPVFEDMASYSVTMSSDVCEYLRRTKLWVYLFDESEDQIPPAYLAKTSIPLQT
LATGRPIRGDYMLWDSTGGTRGIVRVSLRWKYPFQSVKAPQYYRERDQPEREIPEGKRKV
PADKGPHATMRPIAKPRLKGAIRVEPGEEQHGNESSKDHEETEALESDQSRSSSSSDVII
IPPSLKPKRKGDTFRVEILSLSFDPDSRIALDKSVQRVYVEYRLLGVPMETTETPLSLRK
PTDGEEIHYNFIRVIYVDSAESAPLRHYLYTMLEGVDPNQGRLKFTVVSEPLNEQEECID
VGYAYLDLKDLLLTGNDITEKPIDILSLSEDAEVIGQLKVSLEAATALTGIYQEYFRRER
EEC
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgacatcattgcaagagaggctagactcggtgactcatgtgtttgacatgagtgttgaa
gaactgagtgaaactttactccaaattaaggccttcaggctgcagcaggagagccaagag
ggcatgcgtttactgggctccaaggggaaaggggaagacccatatcgtgagatgatcaat
ctacaggcatcctatgctgagacggtgtttgaattgcagaagacaagagacctgctattg
ctacaacacaggattagtgccgatctacaggctgagctccaaaccatcatattcagagca
gatacggagaagcaagagttccagaagaaagtttcagagaaagagagaatgctgaaaagc
cgaatgagacagatcatcacgttacaggctcagctcagggaactggtctacagtcctaag
gtctacaaacggaccgcgccaacagaatactcttggttagggaaggatcaagagaatgtg
tttcccgttgaagatgataacgtagtctttcagctacaaagaggggagtcgctgctcgag
gttcatcttcgaggggtgaccttcaccccccttggtctcagactcatgggccaggcacag
gcaagggaatatggaatgcccacggaggtcacgaccttctgcacgtacgcgctcctggac
tttgagacccattccaccccactggggtctggagtgcagccccactacgccttcacctct
cggtacgccttgtctgtctctgacctggggaaactggcaggacaggggggcatgatgact
gcagacctgcaccagaagctcggcggggtgctttttgtaacctgtggccgagcacagatc
tccttgttggatgcaatggaatacagaggggagcgaataagtggtgccgccaacatcaca
gggaaggatggggaaatccttggggtcttggagctctgggtgcgtctgcagcccaccact
ggaccacccaagtctgtgctggagagggcggcagacagacagctggagagggcggcagac
agacagctggacagagcgtcagacagacagctggagggactaacagagacaagggtgact
cagcagccactgcaccggagagaacatatctatgaggagctgcataaatctgatctggga
acagccaatgagctggaggtggtgctagatcgctgtattggtctcagtgcccgctggccc
gagctgcttcctgatgcctacttaacgtaccagctgtttgacctgccaccccactcctct
cccatcatacactccagtgcagatcctgtgtttgaagacatggccagttactcagtgacc
atgagctcagatgtgtgtgagtacctgcgccgcaccaaactgtgggtttacttgttcgat
gagagtgaagatcagatcccacctgcttacttggccaagacctccatcccactgcagacc
ctggcaactggcagaccaataagaggagattatatgctgtgggactccactggaggtacc
aggggaatcgttcgagtgtcactgagatggaagtacccatttcagtcagtgaaagcccca
caatattacagagagagagatcaaccagagagggagataccagagggcaaaaggaaggta
ccggctgacaaaggaccacatgcaacaatgaggccaattgcaaaacctaggttgaaggga
gccatcagagtcgagccaggagaggagcagcatggaaatgaaagcagcaaagatcatgag
gaaactgaagctttagaatctgaccaatcaagatcctccagtagcagtgatgtcatcatt
attccaccatcattaaaaccaaagaggaagggggacacatttcgagtggagattctttca
ctatcattcgatcccgactcccggattgccttggacaaatctgtccaacgtgtgtatgtc
gagtaccgtctccttggtgttcccatggaaacgacagagacacccctgtctctccgcaag
ccaactgatggagaggaaatccattacaatttcataagagtgatctatgtggacagtgct
gagtctgcccccctcagacactacctgtacaccatgttggagggagttgaccccaaccag
gggaggctgaagttcaccgttgttagtgagccactgaatgaacaagaagaatgtattgat
gttggatatgcctatctggatttaaaggatttactgttaactgggaatgatatcacggag
aagccaattgacattttgagcctgagtgaagacgcagaggtcataggtcaactcaaagtc
tccttggaagcagcgaccgccttgactgggatctaccaagaatacttcagaagagagaga
gaagaatgttaa
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