Clupea harengus (Atlantic herring): 116224734
Help
Entry
116224734 CDS
T09045
Symbol
fancc
Name
(RefSeq) Fanconi anemia group C protein
KO
K10890
fanconi anemia group C protein
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09124 Replication and repair
03460 Fanconi anemia pathway
116224734 (fancc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
char03400
]
116224734 (fancc)
DNA repair and recombination proteins [BR:
char03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
116224734 (fancc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fanconi_C
PRIMA1
Motif
Other DBs
NCBI-GeneID:
116224734
NCBI-ProteinID:
XP_031441366
UniProt:
A0A6P8GU19
LinkDB
All DBs
Position
18:4910044..4941253
Genome browser
AA seq
589 aa
AA seq
DB search
MASCDRLEPLSKPRVQFWMGKVSEWGEATTPSAQLDACRHLEKLRDFLQEVLGALQLARS
AAEALARLPFVGQLLGRLCWIRCVTADEESVALLLQCLWSLFSPSPQTAIELKANEWIQK
TMCHLVTDDEDGCSIMKHVGLPSKEYNVNSLKKMVSLLTEAVDRGCSGLKNPSERCRCDG
MHSLSLTCVSVVTRPEAAPLIGALLRRPVTCDRAQLSEEFVEAVCTSFLDKKLHLDVQSA
VALWCHSLTSLERAVLSLLRCALSGPRVDLQRLDEQVNASLLPQACAQHCPVFLVVNDIF
RSTLLEMEENSVLRMLFQSFTRRFLKALAAQDPEERLSLKSFFPLVPSSLLMPLLTLPSE
VPQDVWLEHLTGISHRLQLATAEAEDRDGDTSGSVFEVWFLLLQGGGWVDVAAQLLASAQ
PSSSSSSSTSSSSQPQALLWLLTFFYHPTNRGHQRTQQWEHMQQFWGDLRSLCLGPVPPP
PPPPPPPPPLQAVAKSLRSSRLVLCLLLNLAIFSPAPCHTAALQLIGKMSEKEEEKEEEE
CLRREAECLLAAAAERSQNSDTSASARVQARLRTLENTLWNALCVCVCE
NT seq
1770 nt
NT seq
+upstream
nt +downstream
nt
atggcatcatgtgacaggctggagcccctctcgaagccccgagtccagttctggatgggc
aaagtgtctgaatggggcgaggccaccaccccctcagcccagctagatgcctgtagacac
ctggagaagctgagggactttctgcaggaggtccttggagcgctgcagctagcgagatcc
gcggcggaggcgctggcgaggcttccctttgtcggccagttgctggggaggctctgctgg
atccggtgtgttacggcggatgaggagagcgtggcccttctcttgcagtgcctgtggagt
ttgttcagcccatccccacagactgccattgagctgaaggctaacgaatggatccagaaa
acaatgtgtcatttagtaacggacgacgaagatgggtgttctataatgaaacatgtagga
ctgccctcaaaagagtacaacgtcaactctctcaaaaagatggtgtcccttctgactgag
gctgtggacagaggctgcagcggtctcaagaatccatcagagaggtgccgctgtgatggc
atgcacagtctgtcgctgacgtgtgtgtctgtggtcacacggcctgaagcggcccctctg
attggtgcgctcctgaggaggcccgtgacatgtgaccgcgcccagctaagcgaggagttt
gtggaggcagtttgcaccagctttctcgataagaagctgcaccttgatgtgcagtcggct
gtggccctctggtgtcatagcctgaccagcctggagagggcagtgttgagtttgttgcgc
tgtgcactctcaggcccaagagtagacctacagaggctggacgagcaggtgaacgcctct
ctcctgcctcaagcctgtgcgcagcattgtcctgtgtttctcgtagtgaacgacatcttc
agatccacattgctagagatggaggagaactcggtgctcagaatgctattccagtctttc
acacgccgcttcctcaaagcactggcagcccaggacccagaggagagactgtctctgaag
agcttctttcctctggtaccttcgagcctcctaatgcccctgctcactttaccttcagag
gttccccaggacgtgtggctcgagcacctgaccgggatcagtcacaggctccagctcgcc
accgcagaggccgaggacagagacggcgacaccagtggctccgtgtttgaggtgtggttc
ctgctgctgcagggtggaggctgggtggatgtggctgctcagctgctggcctcagctcag
ccctcctcctcctcctcctcctccacctcctcttcctcccagccgcaggccctgctctgg
ctcctgacgttcttctaccaccccaccaacagagggcaccagaggacacagcagtgggaa
cacatgcagcagttctggggtgacctgaggagtctgtgtctaggtccagtgcctcctcct
cctcctcctcctcctcctcctcctcctctgcaggccgtggccaagtctctccgctcctcc
aggctggtcctgtgtctcctcctcaacctcgccatcttctccccggcaccgtgtcacacc
gctgccttacagctcattggaaagatgtcagagaaggaggaggagaaggaggaggaggag
tgcctgagacgggaggctgagtgtctcctggctgccgcagcggagcgcagtcaaaatagc
gacacttcggcgagtgccagggttcaggcgaggttgaggacactcgagaacactctctgg
aatgcattgtgtgtgtgtgtgtgtgagtga
DBGET
integrated database retrieval system
