Clupea harengus (Atlantic herring): 116225076
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Entry
116225076 CDS
T09045
Name
(RefSeq) retinoic acid receptor beta
KO
K08528
retinoic acid receptor beta
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
116225076
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
char03310
]
116225076
Transcription factors [BR:
char03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
116225076
Nuclear receptors [BR:
char03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
116225076
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
116225076
NCBI-ProteinID:
XP_031442511
Ensembl:
ENSCHAG00000004943
UniProt:
A0A6P8GWZ3
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Position
19:6599133..6673083
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AA seq
485 aa
AA seq
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MFDCMDVLAVSPGQMLDFYTSSPSSCMLQEKALKACFSGLAQRDWQHRRSAQSIETQSTS
SEELVPSPPSPLPPPRVYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRD
KNCIINKVTRNRCQYCRLQKCFAVGMSKESVRNDRNKKKKESPKPELVETYELTAELEAI
IEKIRKAHQETFPSLCQLGKYTTNSSADTRVRLDLGLWDKFSELATKCIIKIVEFAKRVP
GFTALTIADQITLLKAACLDILILRICTRYTPDQDTMTFSDGLTLNRTQMHNAGFGPLTD
LVFTFANQLLPIEMDDTETGLLSAICLISGDRQDLEEPSKVDQLQEPLLEALKIYVRKRR
PSKPHMFPKTLMKITDLRSISAKGAERVISLKMEIPGSMPPLIQEMLENSEGQDGQGEGK
GGEGKGKGGKGGEGKGGKGKGGEGKGGKGKGGKADDSHTPGDSKSAPAPASSPEPTTEDG
PDDEP
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgttcgactgcatggacgttctcgccgtgagtccagggcaaatgctggatttctacacg
tcgagtccgtcgtcctgtatgttgcaagagaaggctctcaaagcatgcttcagcggactg
gctcagcgggactggcagcatcgccggagcgctcagtcgatcgagacccagagcactagt
tctgaggagctggttccgagccccccctctccactgcccccgccccgcgtctacaagccc
tgcttcgtgtgccaggacaagtcctcagggtaccactatggggtcagcgcgtgcgagggg
tgcaagggtttctttcgccggagcatccagaagaacatggtgtacacgtgtcaccgggac
aagaactgcatcatcaacaaggtgacgcggaaccgctgccagtactgccgcctgcagaag
tgcttcgccgtgggaatgtccaaggagtccgtgaggaacgacaggaacaagaagaagaag
gagtctcccaagccggagctggtggagacgtacgagctgacggccgagctggaggccatc
atagagaagatacgcaaggcccaccaggagaccttcccctcgctctgtcaactgggcaaa
tacaccacgaactccagtgcggacacgcgcgtgcgtctggacctgggtctgtgggacaag
ttcagtgagttggccaccaagtgcattattaagatcgtggagtttgccaagcgcgtgccg
ggcttcaccgcactcaccatcgccgaccagatcacactcctcaaggccgcctgcctcgac
atcctgatcctgcgcatctgcacgcgctacacgccggaccaggacaccatgacgttctcc
gacgggctgacgctgaaccgcacgcagatgcacaacgccgggttcggccccctcaccgac
ctggtgttcaccttcgccaaccagctgctgcccatcgagatggacgacaccgagaccggc
ctcctcagcgccatctgcctcatctcgggagaccggcaggacctggaggagccctccaag
gtggaccagctgcaggagcctctgctggaggcgctgaagatctacgtgaggaagaggagg
cccagcaagccccacatgttccccaagaccctgatgaagatcactgacctgaggagcatc
agcgccaaaggtgcagagagggtcatctctctgaagatggagatccccggctccatgccc
cccctcatccaggagatgctggagaactccgagggacaggacggccagggcgaagggaag
gggggcgagggcaagggcaaggggggcaaggggggcgaggggaaggggggcaagggtaag
gggggcgaagggaaggggggcaaggggaaggggggcaaagcagacgactctcacaccccc
ggagactccaaatctgcccccgcccccgcctcctcccccgagcccaccacagaggacggc
ccggacgatgaaccctaa
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