Clupea harengus (Atlantic herring): 116225149
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Entry
116225149 CDS
T09045
Symbol
lrrtm2
Name
(RefSeq) leucine-rich repeat transmembrane neuronal protein 2
KO
K16665
leucine-rich repeat transmembrane neuronal protein 1/2
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
116225149 (lrrtm2)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_5
LRR_9
LRRNT
LRR_NXF1-5
TMEM154
DHU1_N
LRR_At5g56370
Motif
Other DBs
NCBI-GeneID:
116225149
NCBI-ProteinID:
XP_031442772
Ensembl:
ENSCHAG00000013524
UniProt:
A0A6P8H525
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Position
20:complement(9340585..9344315)
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AA seq
550 aa
AA seq
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MGFHSRWPLVGQAPAALCVMSMLLCLPPTSCTTCPQKCRCEDLQFYCDTQGLLTPPDGID
RGALGLSLRHNSIAELSPDQFFGFTQLTWLHLDHNQITTVQEDAFQGLYKLKDLNLSSNR
ITKLPNTTFIHLINLQILDLSFNQMTVLEPELFHGLRKLQILHLRSNSLRTTPVRAFWDC
RSLEYLGLSNNRLRSLARNGFAGLIKLRELHLEHNHLTKINLAHFPRLVALQFLYLQWNK
INNLTCTMEWTWTTLEKLDLTGNEIRILTPEVFETLPNLKILLLDNNKLSNMDTQTLDMW
KSLGTIGLSSNLWECTKRICTMASWLSTFKGRWEHSILCHSPDYAQGEEILDAVYGFQLC
QNFSAPVSQSSTPTEGMFPQELTSPLYGNMQTPTLDYYAEDLGSFTMVTATLTTSTSTST
TTQTPSTALSTTTMVAGAAVTDDFIDIDNTVLTQRVIIGTMALLFSFFLIIFVVYISRKC
CPPTLRRIRHCSAMQNRRQLRTQQRQPMADLATQVPYNEYEPSHEEGALVIINGYGQCKC
QQLPYKECEV
NT seq
1653 nt
NT seq
+upstream
nt +downstream
nt
atgggtttccattcaaggtggccattggtgggacaagcaccagcggcactttgtgtgatg
agcatgcttctgtgcctgcctcccacgtcatgcacaacctgccctcaaaaatgccgctgt
gaggacctgcagttttactgcgacacgcaggggcttctgacgcccccagatggcatcgac
cgaggggccctcgggctctcgctcagacacaacagcatcgccgagctcagcccggaccag
ttcttcggcttcacccagctcacctggctccacctggaccacaaccaaataaccactgtg
caggaggacgcgttccaggggctctacaagctcaaggacctgaacctgagttccaaccga
atcaccaagctgcccaacacaaccttcatccacctcatcaacctgcagattctggaccta
tccttcaaccagatgactgttctagagccggagcttttccacgggctacgcaagctgcag
atcctccacctgcgctccaactctctgcggaccacgcctgtcagggccttctgggactgc
aggagccttgagtatctcggactcagcaacaaccggctccggagcctggcccgaaacggc
tttgctgggctcattaagctcagagagctgcacttggaacataaccacctgaccaagatc
aacctggcccacttcccccgtctcgtcgccctgcagttcctctacctgcagtggaacaag
atcaacaatttgacatgcaccatggagtggacctggaccaccctggagaaactggatctt
accggtaacgagatccgcatcctcacgcccgaggtgttcgagaccttgcccaacctgaag
atactactactggataacaacaaactgtccaacatggacacgcagaccctggatatgtgg
aaatccctgggcaccattggattgtctagcaacctttgggaatgtaccaaaaggatctgc
accatggccagttggctcagtacctttaagggcagatgggaacactcaattttgtgccac
agcccagactacgcgcagggggaggaaatactggatgctgtctatggatttcagctttgt
cagaatttctcagcaccagttagtcagtcaagcactcccacggagggcatgtttccccag
gagctgactagcccgttgtatggaaatatgcagacccccacgttggactactatgcagag
gatttggggagttttaccatggtcaccgccaccctcaccacctccacctccacctccacc
accacccagaccccaagcaccgccctgtcaaccaccaccatggtggcaggggcagcggtc
actgatgacttcatcgacattgacaacacagtgctcactcagagagtgatcattggaact
atggccctgttgttttccttcttcctcatcatttttgtagtgtacatctcgcggaagtgc
tgccccccgacgctgcgcaggatccgacactgttccgccatgcagaaccggagacagctg
aggacccagcagcggcagccaatggcggacctggcgacccaggtgccctacaacgagtac
gagccgagccacgaggaaggtgcgctcgtcatcatcaacggctacgggcagtgcaagtgt
cagcagctgccttacaaagagtgtgaagtataa
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