KEGG   Clupea harengus (Atlantic herring): 122128497
Entry
122128497         CDS       T09045                                 
Name
(RefSeq) ubiquitin-associated protein 2-like isoform X1
  KO
K26545  ubiquitin-associated protein 2
Organism
char  Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:char00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:char04121]
    122128497
   03400 DNA repair and recombination proteins [BR:char03400]
    122128497
Ubiquitin system [BR:char04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Multi subunit type E3 associated proteins
    122128497
DNA repair and recombination proteins [BR:char03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     122128497
SSDB
Motif
Pfam: UBAP2-Lig UBA_RAD5A UBA_4 GIP1_N
Other DBs
NCBI-GeneID: 122128497
NCBI-ProteinID: XP_042560217
UniProt: A0A8M1K8M2
LinkDB
Position
Unknown
AA seq 1231 aa
MMTSLGSDRARGSRDKVLPATTQNSQPQKQPQATAEQIRLAQMIYDKNDADFEDKVKQLM
EVTGKNQDECMVALHDSNEDVNRAINFLLEGTSDTTASWETVGKKKVGKDSGPSESKENR
ENRDRRGEREGSRGRGGPSKRGRGGSRSRPGEVRAEENGVEPAPVERGADHGRRGRGRVA
GTRGRGRAPGTSRFTAQGMGWVHLQHWHSGGDTETFNPADYTTEAGRAAAQAQAENWEAG
ANDATDGPVAWRSPLEDWAAEDWSEDLSETKVFTASCAPTTENHVTAGQSLDLASLLQKP
AGREEVGGGLKAPSSAPLGHSLVFTNSHHHATRNGGTTPGTASYAHATLSSVLGSGFGEL
GGPKLGQSAGAQILEQLKGPGLGPLPTQPPSSSGANHTPVVGGLGGTAGPAAPPPSSTMV
SSSWDVKPPVTQASMAMPSQFSREFKMQPEPSLVLSQLAQRQTPNALSHASPLPLARQQP
SPPPASSAPAGLLEPFPKLPEPLLLQQQQQMHDAQAAANAQQQRQMKTQKRRIPPSSKIP
SSAVEMPGSADVLGLNVQFGALDFGSESAMPDFSAPSEVGTTTNSSSTISSDAARDTPAV
SQTQSSLYSKPISEALTNPVPLLMPMSSADIIYSSASVPMPSLAPSLSIASAAPMSSVTS
SSSASSAASSFDCGVPPHSRLAFSQSKEAPGPVTNGYNGVRTSAALDSTSASSTPKPESP
SLGSTGSGPPSAPSAHLPPSMPPHSTTLSSLAAEHPSASLPPLSSHVSSVHSALPTSSSH
TVSHLISAHHSSVDSVNSLAPPASVAYSGAQTAGLPISSGGSMGMVSNSAMLHGSGVLGL
TANGTTNNANTVSAMRAAPLLSSSTSKAPPNLSQGVPPLLPNQYIMGPGGLLPAYPQIYG
YEDLHMLQSRLPMDYYGITFPGPAAALSSRDGGLANNPYSGEVTKFGRGDSTSPAPPSSL
SAGHAGQAPQAQQQGQSGSGNAPQTQGHHAAQQAFLNPALPPGYSYTGLPYYPGMPGVPN
AFQYAPTMFVPPASAKQHGMGLSNAPQATPFQQPSSYGQHTFSSGTASHSYGQQTLSSGY
DDLTQGPAGADYSKGYSSSNQTQAKSAASGPGKGVSVTSSNSGVPDISGTVYNKTQSFDK
QGFHAGTPPPFSLPSALGGTGQLNPGGAPGYAPAPFLHILPPHQQPHSQLLHHHLSQDTQ
GGLNQRSQSSSMQQKTQVNKSSYGSSPYWGN
NT seq 3696 nt   +upstreamnt  +downstreamnt
atgatgacttcattaggcagcgaccgagcccggggctctcgggacaaggtgctgcccgca
accacacagaactctcagccacagaaacagccacaggcaaccgccgaacagatccgactt
gcccagatgatctacgataagaacgatgcagacttcgaagacaaagtcaaacagctcatg
gaggtgacggggaagaaccaggatgagtgcatggtggcgctgcacgacagcaacgaggac
gtgaaccgagccatcaacttcctgctggaagggacctcggatacgaccgcctcttgggag
accgtggggaagaagaaggtgggaaaggacagtggcccgtcagagagcaaggagaaccga
gagaaccgggacaggcgcggagagcgggagggcagccgcggacgcggagggcccagcaag
aggggccggggaggcagtcgcagccggcccggtgaggtgcgggcagaggagaatggggtg
gaacctgctcctgtggaaagaggcgctgaccatgggcgcagaggcagaggacgggttgct
ggaaccaggggaagaggcagagccccagggaccagccggtttacagcacagggaatgggg
tgggtacatctccagcattggcacagtggtggcgatacagagaccttcaaccctgcggac
tacaccacagaggcaggcagggctgccgcacaggcacaggcggagaactgggaggcaggg
gccaatgacgccacagatggaccagtggcttggaggagccctctggaggactgggccgca
gaagactggagtgaggacctctccgagaccaaagtgttcaccgcctcttgtgcaccgact
acggagaaccacgtcacagctggccaaagtctggacctggcctctctgcttcagaagccg
gccggcagggaggaagtgggtgggggcctgaaggctccctcgtccgctcccctggggcac
agcctggtgttcaccaactcccaccaccacgccacccgcaacgggggcaccacaccgggc
actgccagctacgcacacgccaccctgtcgtctgtgcttggttctggtttcggcgagcta
gggggccctaagctgggccagtctgccggtgctcagatcctggagcagctgaagggacca
ggcctggggccgctgcccacgcagccgcccagcagctcaggggccaaccacacccctgtg
gtggggggcctggggggaacggcggggccggccgcaccccctccctcatccaccatggtt
tcgtcgtcatgggacgtgaagccacctgtgacgcaggcctccatggctatgccgtcacag
ttcagccgtgagtttaagatgcagccggagccgtctctggtgctgagccagctggcacag
aggcagacccccaacgccctgagccacgccagccccctccccctggcccggcagcagccc
agccccccgccggcctcctccgcccccgccggcctcctggagcccttccccaagctgccg
gagcccttgctgctgcagcagcagcaacagatgcatgacgcccaggctgcggccaacgca
caacagcagaggcagatgaagacgcagaaacgcaggatacctcccagctccaagatcccc
tcgtctgcagtggagatgccgggctcagcagacgtgttggggctgaatgtgcagttcggg
gcgctggactttggctcggagtcggccatgccggacttcagcgcgccttcagaggtcggc
accaccaccaacagcagcagcaccatcagcagcgacgcagccagagacactcctgctgtc
agtcaaacacagagcagcctctactccaaacctatcagtgaggctctgaccaacccggtt
cccctgctgatgcctatgtcctccgcggacatcatctactcctcggcctccgtgcccatg
cccagcctggcgccctcgctcagcatcgccagcgcggcccccatgtcctccgtcacgtcc
tcctcctccgcctcctcggcggccagcagctttgactgtggagtgccccctcactcacgg
ctcgccttctcgcagagcaaagaagcccccggccctgtgacgaatggatataatggtgtg
aggacatcagctgctcttgactccacatccgcgtcctcaacccccaaaccggagtcgccc
tctctgggcagcactggcagtgggcccccctccgctccctcggcccacctgcccccctcc
atgcccccccacagcacaacactctccagcctggcagctgagcacccctccgccagcctc
ccccctctcagcagtcatgtaagcagcgtccactctgcacttcctaccagctcttctcac
acagtgagtcatctcatctcagcccatcactccagtgtggacagcgtgaactcgctggct
ccccctgcctctgtggcatactcaggggcgcagacagcaggcctgcccatcagcagcggg
gggtccatgggcatggtcagcaacagcgccatgctccacggctccggggtgctgggcctc
acggccaatgggaccacaaacaacgccaacacggtgtcggccatgagggccgcaccactg
ctgtcctcctctaccagtaaagcacctcctaacctgtctcagggggttcctcctcttctg
cccaaccagtacatcatgggtcccggaggcctcctgccagcatacccgcagatttatgga
tatgaagacttgcacatgctgcagtctagattacccatggactactacggaatcacattc
ccaggccctgcggcagctctctccagcagagacggcggccttgccaacaacccttactca
ggtgaagtcacaaaatttgggcgtggcgactccacctctccggctccccccagctcgctg
tcggcgggccacgcgggccaggctccccaggctcagcagcagggccagagcggcagtggc
aacgccccccagacgcaggggcaccacgcggcacagcaggccttcctcaacccggcgctg
cccccgggctacagctacacgggcctgccctactaccccgggatgcccggtgtgcccaac
gccttccagtacgcccccaccatgtttgtgccgccggcctcggccaagcagcacggcatg
ggcctcagcaacgcccctcaagccacgccattccagcagcctagcagctacggccagcac
acctttagctcaggtacagcctctcacagctacggccagcagaccttaagctcagggtac
gacgacctgacgcagggtccggcaggagcagactacagcaaaggctacagcagctccaac
cagacacaggccaaatctgctgcctccggcccggggaaaggtgtctctgtgacgtctagt
aactccggtgtgccagatatcagtggaacagtttacaataagacccagtcgtttgataag
cagggtttccatgctggtacccctccccccttctccctgccgtcagctctggggggcact
gggcagctcaaccctgggggggctccgggttacgcacccgcccccttcctgcacatcctc
cccccgcatcagcagcctcactcccagctcctgcatcaccacctgagccaggacacacag
ggtggtctgaaccagaggagccagtccagcagcatgcagcagaagacacaggtcaacaag
tccagttatggcagctccccttactggggcaactaa

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