KEGG   Clupea harengus (Atlantic herring): 122128687
Entry
122128687         CDS       T09045                                 
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM35-like
  KO
K12012  tripartite motif-containing protein 35
Organism
char  Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:char00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:char04121]
    122128687
Ubiquitin system [BR:char04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    122128687
SSDB
Motif
Pfam: zf-RING_UBOX zf-B_box zf-C3HC4_2 zf-C3HC4 zf-C3HC4_4 zf-C3HC4_3 zf-RING_2 zf-RING_5 U-box zf-RING_6 zf-Nse Prok-RING_4 zf-RING_10 zf-ANAPC11 zf-rbx1 Sina_RING DUF4200 Fib_alpha Jnk-SapK_ap_N PIN_12 ZapB Exonuc_VII_L zf-RING_14
Other DBs
NCBI-GeneID: 122128687
NCBI-ProteinID: XP_042559150
UniProt: A0A8M1K9I6
LinkDB
Position
2:3961683..3973070
AA seq 243 aa
MASKLEEDLSCPVCTDIFKDPVVLSCSHSFCKACLQQFWETKGSRECPVCRRRSSKDQPP
TNLALKNLCETFSQERGQRGALCSLHGDKLKLFCHDDQQLVCVVCRDSKLHRNHQFSPIA
EAAVDRKEELKVKVDPLKEKLKAFEKVKLTYDETAKHIKTQAQHTEKQIKGEFEKLHQFL
RDEEAARTASLREEEEQKSQMMKEKIEKMSREMSSLSNTIRAIEEKVGADDITFLQNYKS
TVH
NT seq 732 nt   +upstreamnt  +downstreamnt
atggcttcgaagttagaggaggatttatcctgtcctgtgtgcactgacatcttcaaggac
ccagttgttctgtcatgtagtcacagcttctgtaaagcctgtctgcagcagttctgggaa
accaaaggatccagagaatgtccagtctgcaggagaaggtcatcaaaggatcagccacca
accaaccttgcattaaaaaacctgtgtgagacattttcacaggagagaggtcagagagga
gcactctgtagtctccatggcgacaaactcaagctgttctgtcatgatgatcagcagctt
gtgtgtgtggtgtgccgagactcaaaactccacaggaatcaccagttcagtcccattgct
gaagcagcagttgaccgtaaggaggagctcaaggtcaaagtggatcccttaaaggaaaag
ctaaaggcttttgaaaaagtaaaactcacctatgatgaaacagcaaaacacattaagact
caagcccagcacacagagaagcagatcaagggggagtttgagaagcttcaccagtttcta
cgagatgaagaggcagccaggacagcttcactgagggaggaagaggagcagaagagtcag
atgatgaaggagaagattgagaagatgagcagagagatgtcatctctttcaaacaccatt
agagccatagaagagaaggttggagctgatgacatcacatttctacaaaactacaagagc
acagtacactga

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