Clupea harengus (Atlantic herring): 122128687
Help
Entry
122128687 CDS
T09045
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM35-like
KO
K12012
tripartite motif-containing protein 35
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
char04121
]
122128687
Ubiquitin system [BR:
char04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
122128687
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-B_box
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_4
zf-C3HC4_3
zf-RING_2
zf-RING_5
U-box
zf-RING_6
zf-Nse
Prok-RING_4
zf-RING_10
zf-ANAPC11
zf-rbx1
Sina_RING
DUF4200
Fib_alpha
Jnk-SapK_ap_N
PIN_12
ZapB
Exonuc_VII_L
zf-RING_14
Motif
Other DBs
NCBI-GeneID:
122128687
NCBI-ProteinID:
XP_042559150
UniProt:
A0A8M1K9I6
LinkDB
All DBs
Position
2:3961683..3973070
Genome browser
AA seq
243 aa
AA seq
DB search
MASKLEEDLSCPVCTDIFKDPVVLSCSHSFCKACLQQFWETKGSRECPVCRRRSSKDQPP
TNLALKNLCETFSQERGQRGALCSLHGDKLKLFCHDDQQLVCVVCRDSKLHRNHQFSPIA
EAAVDRKEELKVKVDPLKEKLKAFEKVKLTYDETAKHIKTQAQHTEKQIKGEFEKLHQFL
RDEEAARTASLREEEEQKSQMMKEKIEKMSREMSSLSNTIRAIEEKVGADDITFLQNYKS
TVH
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atggcttcgaagttagaggaggatttatcctgtcctgtgtgcactgacatcttcaaggac
ccagttgttctgtcatgtagtcacagcttctgtaaagcctgtctgcagcagttctgggaa
accaaaggatccagagaatgtccagtctgcaggagaaggtcatcaaaggatcagccacca
accaaccttgcattaaaaaacctgtgtgagacattttcacaggagagaggtcagagagga
gcactctgtagtctccatggcgacaaactcaagctgttctgtcatgatgatcagcagctt
gtgtgtgtggtgtgccgagactcaaaactccacaggaatcaccagttcagtcccattgct
gaagcagcagttgaccgtaaggaggagctcaaggtcaaagtggatcccttaaaggaaaag
ctaaaggcttttgaaaaagtaaaactcacctatgatgaaacagcaaaacacattaagact
caagcccagcacacagagaagcagatcaagggggagtttgagaagcttcaccagtttcta
cgagatgaagaggcagccaggacagcttcactgagggaggaagaggagcagaagagtcag
atgatgaaggagaagattgagaagatgagcagagagatgtcatctctttcaaacaccatt
agagccatagaagagaaggttggagctgatgacatcacatttctacaaaactacaagagc
acagtacactga
DBGET
integrated database retrieval system