KEGG   Clupea harengus (Atlantic herring): 122129080
Entry
122129080         CDS       T09045                                 
Name
(RefSeq) zinc-binding protein A33-like
  KO
K12012  tripartite motif-containing protein 35
Organism
char  Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:char00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:char04121]
    122129080
Ubiquitin system [BR:char04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    122129080
SSDB
Motif
Pfam: PRY zf-RING_UBOX SPRY zf-C3HC4_2 zf-B_box zf-C3HC4 zf-C3HC4_4 zf-C3HC4_3 zf-RING_2 zf-RING_5 U-box zf-Nse Sina_RING zf-RING_6 zf-ANAPC11 DUF4200 Prok-RING_4 zf-RING-like TMPIT ECH_2 DUF6845 zf-RING_10 zf-RING_4
Other DBs
NCBI-GeneID: 122129080
NCBI-ProteinID: XP_042560050
UniProt: A0A8M1KC40
LinkDB
Position
Unknown
AA seq 448 aa
MASKSSLPEEDFTCPVCFDIFKDPVILLCSHSFCKDCLQKFWREKKSKECPVCRRQSSLD
EPPLNLSLRNVCESFRKNSQRVSGGSEVLCSLHGERLKLFCLEDKQPICVVCQASRKHSG
HQFLPIDEAKLYYKEQLNTVLKPLQEKLKEFEEVKKTCDQTASHIKVQAHQSEKQIKEEF
EKLHQFLKDEEEAIIRALKEEEEQKSLIMKEKTEEMSKEMSTLSDTITAIEMQMVAEDII
FLQGVSGALIDVAKHLGNLRFRVWEKMKDIVQFTPVLLDPNTAEPSIIVSEDLTSFKLTC
TRETLPDNPERFGDSYCILGSEGFNSGSHYWDVEVGHSTAWSVGVTTESNQRKRGTISWG
RVWRVGYGFGWHNTGPRHILKQTLHTLRVHLDLDKGQLSFSDPLQNTHIHTFKHTFTEKV
LPFFFSQWSPLSILPLKPSVTIEQCRLC
NT seq 1347 nt   +upstreamnt  +downstreamnt
atggcatctaaaagctctctacctgaagaggatttcacctgtcctgtttgctttgacatt
ttcaaggatcccgtcattcttttgtgcagtcacagcttctgcaaagactgccttcagaag
ttctggagagagaagaaatctaaagagtgtccagtttgtagaagacaatcttcattggat
gaaccgccactgaatttgtctttgaggaacgtatgtgagtctttccggaagaatagtcag
agggtttcaggagggtctgaagtgctctgcagtctgcacggtgagagactcaagctgttc
tgtctggaggataaacagcccatatgtgtggtgtgtcaggcttccaggaaacactcagga
caccagttccttcccatagatgaagctaaactatattataaagaacaactcaatactgta
ctgaagcccttgcaagagaaactgaaagaatttgaagaagttaaaaaaacatgtgaccaa
acagccagtcacattaaggtccaggcccatcagtcagagaagcagatcaaggaggagttt
gagaagcttcatcagtttctgaaagatgaagaggaggccataataagagcactgaaggag
gaagaggagcagaagagtttgattatgaaagagaagactgaagaaatgagcaaggagatg
tccactctttcagatacaataacagccattgagatgcagatggttgctgaagacataatc
ttcttacagggagtttcaggagctctgattgatgtggcaaagcacctgggcaacctgagg
ttcagagtctgggagaagatgaaggacatagttcagttcactcctgtactgttggaccca
aacactgcagaaccatcgatcatcgtttctgaggatctgaccagctttaaattgacatgt
actagagagacactccctgataatccagaaagatttggtgactcttactgtatcctgggc
tctgagggcttcaactcagggtcacactactgggatgttgaagttggacacagtacagca
tggagtgtgggtgtgaccacagagtccaaccagaggaagaggggcaccatctcatggggg
agagtgtggcgtgtggggtacggatttggatggcataatacaggacctaggcatatattg
aaacagactctccacacactcagagtgcatctggatttggataaaggacagctgtcattc
tctgatcctctacaaaatacacacatacacactttcaaacacacattcactgagaaagtc
cttcccttcttcttcagccagtggtcaccactgagtattttaccactgaagccctcggtg
accattgaacaatgcagactatgttga

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