Clupea harengus (Atlantic herring): 122129111
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Entry
122129111 CDS
T09045
Symbol
pif1
Name
(RefSeq) ATP-dependent DNA helicase PIF1
KO
K15255
ATP-dependent DNA helicase PIF1 [EC:
5.6.2.3
]
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
char03032
]
122129111 (pif1)
03029 Mitochondrial biogenesis [BR:
char03029
]
122129111 (pif1)
Enzymes [BR:
char01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
122129111 (pif1)
DNA replication proteins [BR:
char03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
122129111 (pif1)
Mitochondrial biogenesis [BR:
char03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Mitochondrial DNA maintenance factors
122129111 (pif1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PIF1
PH_LRR1
Pif1_2B_dom
AAA_30
AAA_19
AAA_22
Mg_chelatase
Herpes_Helicase
UvrD_C_2
AAA_7
ABC_tran
RsgA_GTPase
AAA_16
AAA_5
Motif
Other DBs
NCBI-GeneID:
122129111
NCBI-ProteinID:
XP_042560083
UniProt:
A0A8M1KCT2
LinkDB
All DBs
Position
Unknown
AA seq
634 aa
AA seq
DB search
MLQGDDGVSFKCCVTIQRLNSSGLAATSQCIRRASVSLERNEFKEIVLRVHDGKAPRNFT
LRDIKLFTRFSKDGKCTVKIIPDNIQILISDCPPDHLATFLKTLSIKHLVWKSSKPLTDR
DKFLAGLPRSFATISPLQQKDVQRANNVRNRACDQQLTSRPERTNNAMNERLQVKRPRAD
HDESMITSLHPSKKHIFASSSGRKLSKEQLSVLGAVLGGKNVFFTGSAGTGKSFLLKRIV
GSLPPKSTYATASTGVAACHIGGTTLHSFAGIGSGSGSLEHCLELAQRPGVLQNWLGCRH
LIIDEISMVDAQFFDKLEAIARSIRRSTEPFGGIQLIVCGDFLQLPPISKGKDKPSFCFQ
ARCWKKCIQMNMELTEVRRQTDQAFISLLQAVRVGRVTKEITCKLEMSAAHNIERDGILA
TRLCTHKNDVELTNENKLQQLPGACRQFEAVDSNPKALRTLDTQSQIENVLRLKVGAQVM
LTKNLDVQRGLVNGARGVVLDFPSANQGLPRIHFLCGVTEVIKRERWVFKASGGQLTSRQ
QLPLKLAWAISIHKSQGMTLDCVEISLARVFESGQAYVALSRARSLEGLRVLDFNPNVVK
ANQDVLLFYNKMTKERLLLQSSMDGFYNKENPPK
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgttacaaggggacgatggtgtttcgttcaaatgctgtgtcactatacagcgtctcaac
tcatctggtctggctgcaaccagtcaatgtattcgacgtgcctctgtaagtttggaacgg
aacgaatttaaggaaattgttctacgagtacatgatggcaaagctcctcggaacttcaca
cttcgtgacatcaaactgtttacacgtttttcaaaggatggcaagtgtactgttaaaatt
atacccgataacatccagattttaatatcagactgccctccagatcatctagccactttt
ctgaagactttgagcattaaacatctggtatggaagtcgagcaagcctttaactgatcgg
gacaaatttctcgccggtcttccgcggagtttcgccacaatcagtcctcttcagcagaag
gatgtacagagagcgaacaatgtcaggaacagagcctgtgaccagcagctcaccagtcgt
cctgagagaaccaataatgcgatgaatgaacgtctacaagttaagagaccaagagcagat
catgatgaaagtatgattacgtctctccaccccagcaaaaagcacatttttgcttcttcc
tcaggacggaaactcagcaaagaacagttatccgtcttgggtgcagtcctcggcggaaag
aatgtcttcttcactgggagtgcaggtaccggaaaatctttcctgttgaagaggattgtg
ggatcccttcctcccaaaagcacctatgccactgcaagcacaggtgtagcggcgtgtcat
attgggggaacaacactacacagctttgcaggtatcgggtcggggtcaggatctctggag
cactgtcttgagttggctcagaggcctggtgttctacagaactggctcggctgcaggcac
cttatcattgatgaaatatccatggtggacgcccagttctttgacaagctggaggccatt
gccaggtccatcagacggtccacggaaccatttggtggcattcagctgatcgtgtgtgga
gatttcctccagctaccaccgataagtaaaggaaaagacaaaccaagcttttgcttccag
gcaagatgttggaagaagtgcattcagatgaatatggagctgacagaggtgcgcaggcag
acagaccaagcttttatctctctgctgcaggctgtgcgagtgggcagggtcaccaaagaa
atcacttgcaagctcgagatgagtgctgcccacaacattgagagagatggtatcttggca
accagactgtgcacacacaaaaatgatgtggaacttactaatgagaacaagctccagcaa
ttaccaggtgcttgtcgtcaatttgaggctgtcgatagcaacccaaaagcgttaaggacc
cttgacacccaaagtcagattgagaatgtactgcgactaaaagtaggagcacaggtcatg
ctgacaaagaatttggatgttcaaagaggcctcgtgaatggagctagaggggttgtatta
gactttccatctgctaatcaaggtcttccacgtatacatttcctctgtggagtgacagaa
gtgattaaacgggaacgctgggtgtttaaggccagtggaggccaacttacaagcagacag
cagctgcctcttaaactagcctgggccatctccatccacaaaagtcaaggcatgactttg
gactgtgttgagatttccctggctcgtgtgtttgagagtggtcaagcgtatgtagccttg
tctcgtgcacgaagcctggagggtttgcgggtgctggactttaaccctaatgtcgtaaag
gccaaccaggatgtcttgttgttctacaataagatgacaaaagagagactgcttttgcag
tcgtccatggatggtttttataacaaggagaatcccccaaaatga
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