Clupea harengus (Atlantic herring): 122129142
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Entry
122129142 CDS
T09045
Name
(RefSeq) rho guanine nucleotide exchange factor 12-like
KO
K07532
Rho guanine nucleotide exchange factor 12
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04270
Vascular smooth muscle contraction
char04625
C-type lectin receptor signaling pathway
char04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
122129142
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
122129142
09153 Circulatory system
04270 Vascular smooth muscle contraction
122129142
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
char04131
]
122129142
Membrane trafficking [BR:
char04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
122129142
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
PH_16
RhoGEF
PDZ
PDZ_6
PDZ_2
SOS1_NGEF_PH
Pept_S41_N_bact
RGS
Motif
Other DBs
NCBI-GeneID:
122129142
NCBI-ProteinID:
XP_042560122
UniProt:
A0A8M1K8D3
LinkDB
All DBs
Position
Unknown
AA seq
1412 aa
AA seq
DB search
MSDTQSTITDRFPKKANRSSSILSKDHPPDKKPKSDRGSLSPPHEFDPTGLVQRCVIIQK
DENGFGLTVSGDNPVFVQLVKQDGAAMRAGVQTGDRIIKVNGTLVTHSNHVEVVKLIKSG
SYVALTVLGRPPGLPQIPLNEGDAELSSPLSTLLSAHTQPPSSPLHAWEENSGSQKVDIL
QRMLSKEQQELQAWREEYLRHPTPKLQRDIQEAQKHIPHLQDQISKAIAATQDVLCLGDG
DERGVVEWDQSSSSTEGVWSGHQNYRPFSSPDGAGPRDGSYPSSRSSAPTDSPRSAPRNS
LTSWMSPEPDTEENTDLDPHAAVGSPSSRLGPQIIGAEDDYFDSEPDQVNGQCSCFQSIE
LLKSRPAHLAAFLHHVVSQFDPAPLLCYLYAELYKNTNSKETRRVFMDFLNIFIDRAANL
KVPLPESISSELEKRRLELIPEELHRQYIQQMQEKLLPDIQRHLEDFRQKRSMGLTVAEG
ELMRLDTERLRDRVALERERTCAENIISKIEEVLLTSQPPEEEKSSTMQYVIFSYMKHLG
VRVKEQRNLESKRVRINFLPKIKKSTKPPEKEGEEKVKKTRFPSILGPQRRLSRNDTTSI
GRAMDQSKQRPQKQLSQPVMGVSEPLDGGRLRGSQSSEGSELTYPTGLSGSPLYSPPTAS
YDPSARDSDSGMSPLSGASRLSEGLLSEGMDGPQSPSSGLDLSPSNLEQLPEEDRDSDRF
LEGGTPKMLRRLGVVGSAETQSEDDQGSEMDSDLDRPNWQHQVGREVLAGLTPHQIKRQE
VINELFHTERTHVQKLKVLDSVFCQKITRDNILPPADIKSIFTNLEDIIQLHVSISDQMT
SIRKRNDTPVVDQIGDDLLAWFGDCEEERVKQAVATFCSNQPFALELIKTKQKKDTRFQR
LVQEAERDRLCRRLQLKDIIPAEMQRVTKYPLLLDDISKYTEEAEEKEKVKSAADCCRRI
LNYVNQAVKEAENKQRLEDYQRRLDLSSLKQSENPMISEFKNLDLTKKTMVYEGPLSWKV
NKDKTIELYTLLLEDILVLLQKQDDRLVLKCHSKNLAGTADTKHIFSPVIKLSTVMVRSV
ATDNKSFFVLSMSDNGAQIYELMAQTVSKQRTWQRQISQRAEAMKVKPHSVIPLPQPDER
DGVELISSGVSKLGKDSDRLSSGSIHSTGTMKADEDDDVIPEEGPFLDAEGADGIAFLQP
HHQGGATDGRDLEPYRAEEALKTLASLKQVLLAQLMTQEESSRGGRGSGNRLLRTTSLRT
PAVDSPSRATLENGSGREAEARADRGGPQDLASGDTGFFEAAEDYAGYLVLEGFGGSRES
STDDELAVGVGAGAKGLALSRGCVGDSGISLRCPSGYPTGSISTFSRQVFTHLRNLQASL
NQLKDMETKYFSLLRQRQADPAMDSEEGKDKR
NT seq
4239 nt
NT seq
+upstream
nt +downstream
nt
atgagtgacacacagtccacaatcactgacaggtttcctaaaaaagcaaaccgaagcagc
agtattctcagcaaagaccaccccccagacaagaagcccaagagtgatcgaggctccctc
tctccgcctcacgagtttgaccccacagggcttgtgcagagatgcgtgatcatccagaaa
gatgagaacggcttcgggctgacggtgagcggagacaaccccgtgtttgtgcagctcgtc
aagcaagatggagcggctatgcgagctggtgttcagacgggggacaggatcattaaggtt
aacgggaccctagttacacattcaaaccatgttgaggttgtcaagttgatcaaatcgggt
tcatatgtagcactcacagttttggggcgcccccccgggctcccccagattccgctcaat
gagggggacgctgagctgtcctcgcccctctccaccctcctctcggctcacacacagcct
ccctcctcgcccctccacgcctgggaagagaatagtggcagccaaaaggtcgacatcttg
cagaggatgttgtcgaaggagcagcaggagttacaggcgtggagggaggagtaccttcgg
caccccacccccaaactgcagcgggacattcaggaggcccagaagcacattccacatctg
caggaccagattagcaaagccatcgcagctacgcaggatgtcctgtgtttgggggatggc
gatgaacgcggtgtggttgaatgggaccagagcagcagcagcactgaaggcgtttggagt
ggacatcagaactatcggcccttcagctctccagatggggcggggcccagagacggtagc
taccccagctccagaagctccgcccccacagacagtccccgtagcgccccacgaaacagc
ctcacttcctggatgtctccagagccggacacagaggaaaacacagacctggaccctcac
gctgcggtggggagcccctcgtctcggctgggcccccagatcatcggcgcggaggatgac
tacttcgactcagaacctgatcaggtgaacggccagtgcagttgtttccagagcatcgag
ctgctgaagtctcgccccgcccacctcgctgccttcctgcatcacgtggtgtcacagttt
gaccctgcccctctgctctgctacctgtatgctgagttgtacaaaaacaccaactccaaa
gagacgcgccgggtcttcatggacttcctgaacatcttcatcgaccgggcagctaacttg
aaagtgccgcttcctgagtcgatctcctccgagctggagaagaggcgtctggagctgatt
ccagaggagctgcacaggcagtacattcagcagatgcaggaaaaactcttaccagacata
cagcgccacctagaggacttcaggcagaagcgcagtatgggcctgactgtggctgagggg
gagctgatgcgtttggacacggagcgcctgagagaccgagtggctctggagagagagagg
acctgtgcggagaacatcatcagcaagatcgaggaagtgctgttgacctctcagccccca
gaagaagagaagagctccaccatgcagtacgtgatcttctcctacatgaagcacttgggc
gtcagggtgaaggaacagcgcaacctggagtccaaacgagtccgcatcaacttcctgccc
aagatcaaaaaaagcaccaaacctccggagaaagagggagaggagaaggtgaagaaaact
cgatttcccagcatcctcggaccacagaggcgtctcagtcgcaatgatacaacgtcaata
ggccgtgcgatggaccagagtaagcagcggccccagaagcagctgtcccagccagtgatg
ggcgtgtcggagccgctggatgggggtcgtctgcggggcagccaatccagcgagggctca
gagctcacctaccccacaggcctcagcggctcccccctctacagcccccccacagcctcc
tacgacccctccgccagggactcggacagcggaatgtcccccttgtccggggcgtcacgg
ttgtctgagggtcttctctctgaggggatggacggaccccagtctccctccagcggcctc
gacctgagccccagcaacctggagcagctaccggaggaggatagagatagtgacaggttt
ctggaaggagggacacccaagatgctgaggaggctgggtgtggtgggctctgcagagacc
cagagcgaggatgaccagggctcagagatggactcggacctggaccgaccaaactggcag
catcaggtgggccgtgaggttctggccggtctcacgccccaccagatcaagagacaggaa
gtcatcaacgagctgttccacacggagcgcacccatgtgcagaaactgaaggtgctggac
tcggtcttctgccagaagatcacccgagacaacatactgccccctgctgacatcaagagc
atcttcaccaacctggaggacatcattcagctgcacgtctccatatcggaccagatgacc
tccatccgaaagaggaacgacaccccggtggttgaccagattggagatgacctgctggcc
tggtttggggactgtgaggaggagcgggtgaagcaggcagtggccaccttctgcagtaac
cagcccttcgctctggagctcatcaagaccaagcagaagaaggacacgcgctttcagcgc
cttgtgcaggaggctgagagagatcgtctgtgtcggcgactccagctgaaggacatcatc
cctgctgagatgcagagagtcaccaagtatcctctgctcctggacgacatcagcaaatac
acagaggaggctgaggagaaggagaaggttaagagtgcagctgactgctgcaggaggatc
ctgaactacgtgaaccaggccgtgaaggaggctgagaacaaacagaggctggaggactac
cagaggcgattggacctgtcgtctctgaagcagagtgagaatcccatgatctccgagttt
aagaacctggacttgaccaagaagacgatggtgtatgagggccccctgtcctggaaggtc
aacaaagacaagaccatcgagctttacacgctgctcctggaggacatcctagttctcctc
cagaagcaggatgatcgtttggtgctgaagtgccacagtaagaacctggcaggaaccgcc
gacaccaaacacatcttcagccccgtcatcaagctcagcacagtcatggtccgatcagtc
gctacagataacaagtccttctttgtgctgtccatgtccgacaacggagctcagatctac
gagctgatggcccagaccgtctccaagcagaggacgtggcagcgtcagatcagtcagaga
gcagaggccatgaaggtgaagccacacagtgtcatccccctgcctcagccggatgagagg
gacggtgtggagctgatctcctcaggtgtgtccaaactagggaaggactctgaccgcctc
tcttcagggagcatccactctacaggaacgatgaaggcagatgaggacgacgacgtcatc
ccagaggaaggccccttcctggatgcagagggggctgatgggatagcgttcctccagccg
catcatcagggcggagccacagacggcagggatctggagccctacagagccgaggaggca
ctcaaaaccttggcgtcgctgaagcaggtgttgctggcccagctcatgactcaggaggag
agttctcgcgggggccggggatcgggcaaccggctcctgaggaccacgtcgctgcgcacc
cccgccgtcgactcccccagcagggccacgctggagaacggctcggggcgggaggctgag
gccagagcggaccgagggggaccacaggacctggcctcgggggacacggggttcttcgag
gcggctgaggactatgctgggtacctggtgctggagggcttcggaggctcccgggagagc
agcacggatgacgagctggcagtgggggtgggcgcgggggccaagggcctggctctgtcc
cgtggctgtgtgggggactcgggcatcagcctgcgctgcccctcggggtaccccaccggc
agcatctccaccttcagccgccaggtcttcacacacctgcgcaacctgcaggccagcctc
aaccagctcaaggacatggagaccaagtacttcagtctgctccgccaaaggcaagcagac
ccagcaatggactccgaggaggggaaagataagagatag
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integrated database retrieval system
