Clupea harengus (Atlantic herring): 122129148
Help
Entry
122129148 CDS
T09045
Name
(RefSeq) guanylate-binding protein 1-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122129148
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
RHD3_GTPase
MMR_HSR1
PAS_GdpP
HAD_RAM2_N
Motif
Other DBs
NCBI-GeneID:
122129148
NCBI-ProteinID:
XP_042560127
UniProt:
A0A8M1K8D6
LinkDB
All DBs
Position
Unknown
AA seq
597 aa
AA seq
DB search
MKEPVCLIDNGTDGRLRVQQRSLQILEQIQQPVVVVAVVGLYRTGKSYLMNRLAGTQTGF
ALGSTIESKTKGIWMWCVPHPNKAGHTLVLLDTEGLGDVEKGDEKHDTWIFCLTLLLSST
LVYNSLGTIDNNALEKLQFVAELTEHIKVKSSEHDRKTELMLVFPSFVWTVRDFTLELEL
KGKPITADEYLENALKLKPVETGSSPEVLKHNKLRQNLRDFFAVRRCFVMERPASGKDMK
RMEQLRDSDLESSFVQQAKAFCSYIHHSAQVKAMRGGRGLNGRMLGNLAETYVEAIRSGK
VPCLESAVESLAAIQNGRAITEALKFYRAEMERKVKFPTETQEALSMIHTAAEKLAISIF
INESFNDQDHKYQQQLVTDMAKEYGELCKKNVKVSREVCRSVISQAFASLEKALNNGSYM
RSGGYEDFRSALNRGAQLYRSEKRKGVMSEEVLTEYLEEKNVVGKSIRAADCSLTKAQKK
MEEDKVRRKEAEQQQKLLVQRNRLQQQAMWDLERSNEENIRQLEVKMEGERVRAQAELER
VVTAKLKEQRELLDCGFKRRAQDMEEDIRKLQTDQKKAQEKKKSPSFWGKVAGFFGF
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgaaggagccggtgtgtctgattgataatgggacagacgggcgcttgcgtgtccaacag
aggtcgctacagatcctggagcagatccagcagccggtggtggtggtggctgtggtgggg
ctctaccgcacggggaagtcttacctcatgaaccggctggctgggacacaaacaggcttt
gctttgggcagcaccatcgagtccaagaccaagggcatctggatgtggtgtgtgcctcac
cccaataaagcaggtcacaccctggtgctgctggacacagaggggctgggagacgtagag
aagggcgatgagaaacacgacacctggatcttctgtctgactctcctactcagcagcact
ctggtctacaacagcttgggcaccatcgacaacaatgccctggaaaaactgcagtttgtt
gctgaactgacggagcacatcaaggtaaagtccagtgagcatgaccggaagacagaactg
atgctggttttcccctccttcgtgtggacggtcagagactttactctggagctggagctg
aagggcaaacccatcactgccgatgagtacctggagaacgccctgaagctgaaaccagtc
gaaacaggctcctccccggaagttcttaagcacaataagttgcggcagaacctgagggac
ttctttgctgtgcggcgctgcttcgtgatggaacgtccagccagcggcaaagacatgaaa
cgcatggagcagctgagggactctgacctggagtccagctttgtgcagcaggcaaaagcg
ttctgcagctacatccaccacagcgcccaggtcaaggccatgagaggaggccgggggctg
aacggcaggatgctgggcaacctggcagagacgtatgtggaggcgatccgcagtgggaag
gtgccgtgtctagagagcgctgtggagtcgctggcggcgatccagaacggccgggccatc
acagaggctctgaagttctaccgggcggagatggagcgcaaagtgaagttccccacagag
actcaggaggcgctgtctatgattcacactgctgcagagaaactggccatcagcattttc
atcaatgaatcattcaatgaccaggaccacaaataccagcagcagcttgtgacagacatg
gcgaaagagtatggggagttgtgtaagaagaatgtaaaagtgtctcgtgaggtgtgccgg
tcagtcatctctcaggcgtttgcctctctggagaaagctctgaacaacggctcctacatg
aggtctgggggctatgaagacttccgctctgcactcaacagaggagctcaactctacaga
tcagaaaaacgcaagggagtcatgagtgaggaggtcctgacagagtatctggaggagaag
aacgtagttgggaagagcatccgtgctgctgactgctcgctaactaaagcccaaaagaag
atggaagaggacaaggtaaggcggaaggaagccgagcagcagcagaaacttctggtacag
cgtaacaggctccagcagcaagccatgtgggacctggagagaagcaatgaggagaacatc
aggcagttggaggtgaagatggagggggaaagagtgagagcccaggcagagctggagcgg
gttgtaaccgctaaactcaaggagcagcgggagctactggattgtggctttaagaggcgt
gctcaggacatggaggaggacatcagaaagctacagacagatcagaagaaagcgcaggag
aagaagaagagcccgtccttctggggaaaggtggccggtttttttggcttctag
DBGET
integrated database retrieval system