Clupea harengus (Atlantic herring): 122129158
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Entry
122129158 CDS
T09045
Name
(RefSeq) very long-chain acyl-CoA synthetase-like
KO
K08746
solute carrier family 27 (fatty acid transporter), member 2 [EC:6.2.1.-
6.2.1.3
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03320
PPAR signaling pathway
char04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
char00001
]
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
122129158
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
122129158
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
char01004
]
122129158
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
char02000
]
122129158
Enzymes [BR:
char01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
122129158
Lipid biosynthesis proteins [BR:
char01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
122129158
Transporters [BR:
char02000
]
Solute carrier family (SLC)
SLC27: Fatty acid transporter
122129158
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-GeneID:
122129158
NCBI-ProteinID:
XP_042560135
UniProt:
A0A6P3VFR2
LinkDB
All DBs
Position
Unknown
AA seq
619 aa
AA seq
DB search
MYIVTVTLATLVIIPVLLKIFFPYFWEDVVYLKDLVRILLTFVSRRKRRPLFLAVDRFIE
QSALHPNRTFVLFENKSYSYQDADRESNKIANALRAYSRLQAGEAAALFMGNEPTFMFTW
LALAKLGCPVAFLNHNIRSKSLLHCFSCCDAKVLIAAVELEDALKEIQPALKEKGVCVFI
MTKECSISEFTSFTDKVEFASDSPISRSHRSQITFKSPAVYIYTSGTTGLPKAATVSQTR
LLAALAVLASNGVTAGDVIYLNLPMYHTAGFLIGFIGSIETGATIVLRRKFSASQFWDEC
RKYNITVIQYIGEVLRYLCNTPKKENDQLHKVRLAIGNGLRAEIWREFLNRFGNIQVREF
YASTEGNVGFVNYIGKIGAIGRVNPFHKKFFPYALIKYDTEGDEPVRNSKGLCIEASKGE
TGLLVSKITDIAPFVGYANNQQQTEKKKLRNVFKKGDLYFNSGDLLRIDWENFIYFQDRV
GDTFRWKGENVATTEVSDIVTMIDFVEEANVYGVQVPGHEGRIGMAAVTITKGKALDSKK
MFSHVASYLPAYAQPRFIRIQNSVEVTGTFKQMKKTLVEEGFNPTLITDPLFFLDDKEKS
YIPMTKDIYKAVVSGNSKL
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgtacattgtaactgtgactttggccactttggtcatcatcccagtgttgctgaaaata
tttttcccctacttctgggaagatgttgtctacctcaaggatttggttcggattttactc
acgtttgtttcacgcagaaagagaagacctttatttttagctgtggatcgatttatagag
cagtcagccctacatcctaataggactttcgtcttatttgaaaacaaatcatattcttat
caagatgcggacagagaaagcaacaaaattgcgaatgctttacgggcgtattctcgcctt
caagcgggggaagctgcggcgctcttcatggggaacgaacctacgtttatgtttacctgg
cttgcactggcaaagctaggatgcccggtagcttttctcaatcacaacatcagatcgaag
tctttgcttcattgttttagctgctgtgatgctaaagtcctcattgccgctgtagaactt
gaggatgctctgaaagaaatccagccagcgcttaaggagaagggtgtttgtgtgttcatt
atgaccaaagagtgcagcatctccgagtttacaagcttcacagacaaagttgaatttgcc
tctgattcccccatatcccgttcacaccgctcacaaataaccttcaaaagccctgctgtg
tatatttatacatcaggcaccacaggccttcctaaagcagccactgttagccagacccgt
ctactggctgcacttgctgtgttagcttccaatggtgtcactgcaggggatgtcatctac
ctcaacctacctatgtaccatacggcaggtttcctcattgggtttataggaagcattgaa
acaggtgccactattgttttacgaagaaagttttcagcttcacagttctgggatgaatgc
agaaagtacaacatcacagttatccagtatataggagaggttttacgctatctttgcaac
acgccaaagaaagagaatgatcaacttcataaagtgagacttgccattggaaatggccta
cgtgcagagatatggagagagttcctgaatcgttttggcaacattcaagttagagagttt
tatgcatccactgagggaaatgtgggatttgtcaactacattggcaaaattggtgcaatt
ggccgggtcaacccttttcataaaaaatttttcccttatgctttgataaaatatgatact
gagggagacgagccagtgaggaactccaagggtctctgtattgaagcttcaaagggagag
accggcctgctggtttcaaagataacagacattgctccttttgtgggatacgctaataac
caacaacagacagagaagaagaagcttcgaaatgtgtttaaaaagggggacctgtacttc
aacagtggagatcttctgagaatcgattgggaaaacttcatctatttccaggatcgtgtt
ggagacacttttagatggaaaggagagaatgtggcaacaactgaagtctcagacattgtc
acaatgattgactttgttgaggaggccaatgtgtacggagttcaagttccaggccatgaa
gggaggattgggatggcggctgtaacaataacaaaaggaaaagcgttggacagtaagaaa
atgttcagccatgttgctagttatctccctgcatatgctcaaccacgtttcatcagaatt
cagaattctgttgaggtgacggggacattcaagcaaatgaagaagacgctggtggaagaa
ggcttcaaccccaccttgataacggatcccctctttttcctggatgacaaagagaagagt
tatataccaatgaccaaggacatttataaggcagttgtgtcaggaaatagcaagctgtga
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