Clupea harengus (Atlantic herring): 122129249
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Entry
122129249 CDS
T09045
Name
(RefSeq) high mobility group-T protein-like
KO
K10802
high mobility group protein B1
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03410
Base excision repair
char04140
Autophagy - animal
char04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
122129249
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122129249
09143 Cell growth and death
04217 Necroptosis
122129249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
122129249
03400 DNA repair and recombination proteins [BR:
char03400
]
122129249
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
char04147
]
122129249
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
122129249
DNA repair and recombination proteins [BR:
char03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
122129249
MMR (mismatch excision repair)
Other MMR factors
122129249
Exosome [BR:
char04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
122129249
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
HMG_box_2
HMG_WDHD1
RNA_pol_3_Rpc31
GnsAB_toxin
Motif
Other DBs
NCBI-GeneID:
122129249
NCBI-ProteinID:
XP_042560173
UniProt:
A0A8M1KD13
LinkDB
All DBs
Position
Unknown
AA seq
205 aa
AA seq
DB search
MGKDPRKPRGKRSSYSYFVQTSREDQKQHPDASVNCSGFSTKCSEQWKAISAKDKRKFED
MAEQDKVRYESEMKNYIPPKGEEKRRFKDPNAPKKPASAFFIFCPDIRPKIKGDNPGLTP
GDIAKKLGEMWKSSAADVKQPYEKKAAKLKEKYDKDIAAYRTKGIAGLSKKDDDDDDDDG
DEEDDDDDDDDGDEEDDDDDDDDDN
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atgggtaaagatccaaggaagccacgaggaaaaaggtcctcatattcctactttgtgcag
acgtccagggaggaccagaagcaacaccctgatgcgtccgtgaattgctctggattctcc
acgaaatgctctgagcaatggaaggccatatctgcgaaagataagaggaagtttgaggac
atggctgaacaggataaggtccgctatgagagtgaaatgaaaaattacatcccacctaag
ggtgaggagaagagacggtttaaggaccccaatgccccaaaaaaaccagcatctgcattt
ttcatcttctgccccgacatccgccctaagatcaagggggacaatccaggtctaactcct
ggagacatcgcaaagaagcttggggagatgtggaaaagctctgctgctgatgttaaacag
ccctatgaaaagaaggctgctaaactgaaggagaagtatgacaaggatattgctgcatat
cgtacaaaaggaatagcaggtttgtccaaaaaggatgatgacgatgatgatgatgatggc
gatgaggaggatgacgacgacgatgatgatgatggcgatgaggaggatgacgacgacgat
gatgatgatgacaactaa
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integrated database retrieval system
