Clupea harengus (Atlantic herring): 122129261
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Entry
122129261 CDS
T09045
Symbol
cpsf4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
122129261 (cpsf4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
char03021
]
122129261 (cpsf4)
03019 Messenger RNA biogenesis [BR:
char03019
]
122129261 (cpsf4)
Transcription machinery [BR:
char03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
122129261 (cpsf4)
Messenger RNA biogenesis [BR:
char03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
122129261 (cpsf4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
Torus
zf-CCCH_3
zf-CCCH_2
zf-CCHC
zf-CCCH_4
zf-CCHC_3
Nab2-like_zf-CCCH_
zf-C3H1
Motif
Other DBs
NCBI-GeneID:
122129261
NCBI-ProteinID:
XP_042560184
UniProt:
A0A8M1KE80
LinkDB
All DBs
Position
Unknown
AA seq
267 aa
AA seq
DB search
MQELIASADHFKFDLEFAVEQQLGAQPLPFPGMDKSGAAVCEFFMRASCMKGGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPDCRHRHTRRVICVNYLVGFCPEGRSCKFMHPRFELPMGASEQPP
LPLQSQTQQKTMHPGNRSSLSLIQLTNTNSNHQQRMPHNIGAMHSQNNMGGNRGPRPLDQ
VTCYKCGEKGHYANKCTKGHLAFLSGQ
NT seq
804 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagttgatagcaagtgctgatcatttcaaatttgatctggagtttgctgttgag
caacagctgggtgctcaaccgttgccatttcctggaatggacaaatctggtgctgctgtg
tgtgagttttttatgagggcatcttgcatgaagggtggcatgtgtcccttccggcacatc
agtggagaaaaaacagtggtttgtaaacactggcttcgagggttatgcaagaagggggac
cagtgcgagttccttcatgagtatgacatgaccaagatgcccgagtgctatttttattca
aaatttggggagtgtagcaacaaagaatgtccctttttacacattgaccctgagtccaag
attaaagactgcccatggtatgacagaggattctgtaaacacggcccagattgtagacac
agacatacacgaagggttatttgtgtcaactaccttgttggcttctgtcctgagggcagg
tcctgcaagttcatgcacccacgttttgagttgccgatgggtgcctctgagcaacctcct
ttgcccctgcagtctcagactcagcagaagaccatgcaccccggaaacaggtcgtcattg
tcactgattcagctgaccaacaccaattctaaccaccaacagaggatgccacacaatata
ggagcaatgcattctcaaaacaatatggggggaaaccgaggtcctcgcccgttagaccaa
gtcacctgttacaagtgtggagagaaaggtcactatgccaacaagtgtacaaagggacat
ctggccttcctcagtggacagtag
DBGET
integrated database retrieval system
