Clupea harengus (Atlantic herring): 122129288
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Entry
122129288 CDS
T09045
Name
(RefSeq) guanylate-binding protein 1-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122129288
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
MMR_HSR1
RHD3_GTPase
URGCP_GTPase
GM130_C
7TMR-HDED
Motif
Other DBs
NCBI-GeneID:
122129288
NCBI-ProteinID:
XP_042560237
UniProt:
A0A8M1K8P0
LinkDB
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Position
Unknown
AA seq
612 aa
AA seq
DB search
MPAPVCLIENAEEGLRTVESALDILRGIQQPVVVVAVVGLYRTGKSYLMNRLAGKQSGFA
LGSTLESKTKGIWMWCVPHPSKTGHTLLLLDTEGLGDVDKGDPKNDAWIFCLGVLLSSTL
VYNSRGTIDYQAIEKLHYVAELTGSIRIKSEAGGDEEDCKFVRFFPSFVWAVRDFTLERK
IDGRNVSEDEYLDFALKLKKGQSTKVMAYNQPRLCIRNFFPTRKCFTFPFPTIACNMEQL
DPMAEADLFPDFHSVTGRFCSYIFAESRVKTVQGGHEVNGSRFSHLVKIYVDTIKSGSVP
CLENAVVAMAEIENQSAVNKGFRLYEQGMGDFSKTFPMDVGTVSAEHQRLDAMATQEFLK
NSFKDEGGKYMTQLAEKVSQLFEQLITQNMEASEMLCRKLLLDLYGPMAANIQQGTYAKA
GGYEIYCRDRDAMVAKYRQHDKKGMKGEEVLEKFLQEKNAEATAILKADKALTEVQKEMA
EAHEKTRVQEQKAKVEEQRLKDLQRALEDELRGQEEWVRHLEEKMEEEKKLQQEEWTRVL
EGKLEEQKEMMEKWFKNKAEIMSQEIEQLKKEMQNNQEAKPGFFKECIMPIVTISADVLS
KYLQYKQGAACP
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgccagcacctgtgtgcttgattgagaatgcagaggagggactgcggactgtggaatca
gccctggacatcctcagggggatccagcagcctgtggttgttgtggctgtggtggggttg
taccgcactggcaagtcttaccttatgaatcggctagctgggaaacagtcaggctttgct
ctgggcagcacccttgagtctaagaccaaaggcatctggatgtggtgtgtgcctcacccc
tctaagacaggacatacactgttgctgctagacactgaaggactgggtgatgtcgacaag
ggcgacccgaagaatgatgcctggatcttctgtctgggtgtgctgctcagtagcaccctg
gtgtacaacagcagaggcaccatcgattaccaggctatagagaaactccactatgtggct
gagttgactggaagcatccggataaagtcagaagcgggcggcgatgaggaggactgtaag
ttcgtccgcttcttccccagcttcgtttgggccgttcgggacttcactctggagaggaag
attgatggtcggaatgtgagcgaggacgagtacctggactttgccctgaagctgaagaaa
ggtcagtctactaaagtgatggcctacaaccaaccgagactgtgcatccggaacttcttc
ccgacccggaagtgcttcaccttcccattcccaacgattgcatgcaacatggagcaactg
gaccccatggctgaggccgaccttttcccagacttccatagtgtcactggccgcttctgc
agttacatctttgcagagagccgtgtgaagacggtacagggtggccacgaggtcaacggc
agccggttcagccatcttgtgaagatctacgtggacaccatcaaaagtggcagcgttccc
tgtctggagaatgctgtggttgccatggcagagattgaaaaccagtcggccgtgaataag
ggcttccggctctatgagcagggcatgggggatttcagtaagacctttcccatggatgtt
ggaactgtctcggcagaacaccaacgcctcgacgccatggcaacgcaggaattcctcaaa
aattccttcaaggatgagggggggaaatacatgacacagctggcggagaaggtgtctcag
ctctttgagcagctgatcactcagaacatggaggcttctgagatgctgtgtcggaagctt
ctcttggatctctatggaccgatggccgccaacattcagcagggcacctatgccaaggca
ggtgggtatgagatctactgccgtgaccgagacgccatggtggccaagtaccggcaacat
gacaagaagggcatgaagggggaagaggtgttggagaagtttctccaggagaagaacgct
gaggccaccgccatcctgaaggctgacaaggcactcacagaggtccagaaggagatggct
gaggcccatgagaagacgagggtgcaggagcagaaggccaaggtcgaggagcagcggctt
aaggacctgcagcgcgccctggaggacgagcttcgcggccaggaggagtgggtgaggcac
ctggaggagaagatggaggaggagaagaaactccagcaagaggagtggacgcgagtcctg
gagggaaaactggaggagcagaaggagatgatggagaagtggttcaagaacaaggctgag
atcatgagccaggagatcgagcaactcaagaaggagatgcagaacaatcaagaggccaag
ccagggttcttcaaggaatgcatcatgcctatagtcacgatcagcgctgatgtcctctcc
aagtacctgcagtacaaacaaggggcggcttgtccataa
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