Clupea harengus (Atlantic herring): 122129424
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Entry
122129424 CDS
T09045
Symbol
cacnb2a
Name
(RefSeq) voltage-dependent L-type calcium channel subunit beta-2a isoform X1
KO
K04863
voltage-dependent calcium channel beta-2
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04010
MAPK signaling pathway
char04260
Cardiac muscle contraction
char04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
122129424 (cacnb2a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
122129424 (cacnb2a)
04261 Adrenergic signaling in cardiomyocytes
122129424 (cacnb2a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
char04040
]
122129424 (cacnb2a)
Ion channels [BR:
char04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
122129424 (cacnb2a)
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Gene cluster
GFIT
Motif
Pfam:
Guanylate_kin
VGCC_beta4Aa_N
SH3_1
ImpA_N
Motif
Other DBs
NCBI-GeneID:
122129424
NCBI-ProteinID:
XP_042560275
UniProt:
A0A8M1KCQ5
LinkDB
All DBs
Position
Unknown
AA seq
584 aa
AA seq
DB search
MYLSASEDSDGGSADSYTSRPSDSDVSLEEDKDALRQAETQLDNAQSKPVAFAVRTNVNY
SPALEDHVPVPGMAVAFEAKDFLHVKEKFNNDWWIGRLVKEGCEVGFIPSPVRLETSRLQ
QEQRAKQSRFRSMANSSSSLGDIIPSSRKSTPPSSALDIDVTELELEEIDAPPPQRSPKA
NSNSAPPLLAREKRMPFFKKSEHIPPYDVVPSMRPVVLVGPSLKGYEVTDMMQKALFDFL
KHRFEGRISITRVTADISLAKRSVLNNPSKQAIIERSTTRSNLAEVQSEVERIFELARTL
QLVVLDADTINHPTQLGKTSLAPILVYVKISSPKVLTRLIKSRGKSQAKHLNVQMVAADK
LAQCPTVSAMEMFDIILDENQLEDACEHMADYLEAYWKSTHPSSEATTNQLSETQDTPPA
LPSTPLGIRREGNSAGPEEERKDHHHHHHHHRQSQKEEKQQQGEQPLRRAESGRRSAHTH
THTHTHHHSFSARTEHQRHSRARGQGRLSRQNTPESQDSHTHSVTHTSHSVTHTSHSVTH
TWPEPPEEEEEEEEEEEEDRRQTSRHDHHHHRHHDNVGALPLIP
NT seq
1755 nt
NT seq
+upstream
nt +downstream
nt
atgtacctctcggccagcgaagactccgacgggggctcagcagactcgtacaccagccgt
ccgtctgactctgatgtgtctctagaagaggacaaagatgcactgagacaagctgagact
cagctagacaacgcccagagtaagcctgtggcgtttgcagtgcgcactaatgtcaactac
tctcctgccctggaggaccacgtccctgtgccaggaatggctgttgcatttgaagccaaa
gactttctccatgtcaaagagaagtttaataatgactggtggattggccgcctggtgaag
gaggggtgtgaggtgggcttcatcccgagtcccgtcaggctagagaccagccgactacag
caggagcagagagccaagcagagcagattcagatctatggccaactcctcctctagctta
ggggacatcattccaagctccagaaaatcgacccctccttcatctgccctggacatagat
gtcacagagttagagttagaagagattgatgccccgcccccccagcgctccccgaaggcc
aattcaaactcagccccgccccttttagccagagaaaaacgaatgcccttctttaagaag
tcagagcacattcctccttatgatgttgttccttccatgagaccggtggtgctggtgggg
ccgtcgctcaaaggctacgaggtaacggacatgatgcagaaagccctttttgacttttta
aaacacagatttgaaggacggatctcaatcactcgtgtgactgcagatatctctcttgca
aagcgttcagttctgaacaaccctagcaaacaagccatcatagaacgctcaaccacacgc
tctaatctggctgaggtgcagagcgaggtagagcgcatctttgagctggcgaggaccctg
cagctggtggttcttgatgctgacaccataaaccacccaactcaactagggaagacctca
ctggcccccatcctagtgtacgtcaagatctcctctccaaaggttctgacgaggctgatt
aagtctcgtggaaagtcccaagccaaacatcttaacgtccagatggttgcagctgacaaa
ctagcccagtgccccacagtgagtgccatggagatgtttgacatcatcctggatgaaaac
cagctggaggacgcgtgtgagcacatggccgactatctggaagcttattggaagtctact
cacccatccagcgaggcaacaaccaatcagctgtctgaaacacaggacactccccctgcc
ctgccttctacccctctgggaattcgaagagaggggaacagtgctggcccagaggaggag
aggaaggatcaccatcatcatcatcatcatcatcgccagtcacagaaggaagaaaagcaa
cagcagggagaacagccactccggagggctgagagcggccgccgcagcgcacacacacac
acacacacacacacacaccaccactcattctcagcacggactgaacaccagcgccacagc
agagcacggggccaaggacgtctgtctcggcagaacacaccggagagccaggactcacac
acacactctgtcacacacacgtcacactctgtcacacacacgtcacactctgtcacacac
acgtggcccgagccacctgaggaggaagaggaggaagaggaggaggaggaggaggaccgg
cgccagaccagtcgtcatgaccaccaccatcatcgtcaccatgacaacgtgggggcgctc
ccactcatcccatga
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