Clupea harengus (Atlantic herring): 122129447
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Entry
122129447 CDS
T09045
Name
(RefSeq) ubiquitin-60S ribosomal protein L40
KO
K02927
ubiquitin-large subunit ribosomal protein L40e
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char03010
Ribosome
char04120
Ubiquitin mediated proteolysis
char04137
Mitophagy - animal
char04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
122129447
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
122129447
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
122129447
04137 Mitophagy - animal
122129447
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
char03011
]
122129447
04121 Ubiquitin system [BR:
char04121
]
122129447
Ribosome [BR:
char03011
]
Ribosomal proteins
Eukaryotes
Large subunit
122129447
Archaea
122129447
Ubiquitin system [BR:
char04121
]
Ubiquitins and ubiquitin-like proteins
Ubiquitins
122129447
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Ribosomal_L40e
Rad60-SLD
Ubiquitin_2
Rad60-SLD_2
DUF2604
TBK1_ULD
Ubiquitin_5
zf-C4pol
OTU1_UBXL
Dsc3_N
UBL_UBAC1
Motif
Other DBs
NCBI-GeneID:
122129447
NCBI-ProteinID:
XP_042560298
UniProt:
A0A8M1KDD0
LinkDB
All DBs
Position
Unknown
AA seq
128 aa
AA seq
DB search
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYN
IQKESTLHLVLRLRGGIIEPSLRQLAQKYNCDKMICRKCYARLHPRAVNCRKKKCGHTNN
LRPKKKLK
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgcagatctttgtgaaaacgttaacggggaagaccatcacccttgaggtggaacccagt
gataccatcgaaaatgtcaaggcaaaaatccaggacaaagaaggtatccctcctgatcag
cagcgtctgatcttcgctggcaaacagctcgaggatggccgcacactgtcagactacaac
attcaaaaagagtctactctgcaccttgtgctccgcctgcgaggaggcatcattgagcct
tctctgaggcaactggcccagaagtataactgcgacaagatgatctgccgcaagtgctat
gctcgccttcacccccgcgccgtcaactgccgcaagaagaagtgtggccacaccaacaac
ctgcgccccaagaagaagctgaagtag
DBGET
integrated database retrieval system
