Clupea harengus (Atlantic herring): 122129485 Help Entry 122129485         CDS       T09045                                  Name (RefSeq) collagen alpha-2(VI) chain-like   KO K06238   collagen type VI alpha Organism char  Clupea harengus (Atlantic herring) Pathway char04510   Focal adhesion char04512   ECM-receptor interaction char04518   Integrin signaling char04820   Cytoskeleton in muscle cells Brite KEGG Orthology (KO) [BR:char00001]  09130 Environmental Information Processing   09133 Signaling molecules and interaction    04512 ECM-receptor interaction     122129485    04518 Integrin signaling     122129485  09140 Cellular Processes   09144 Cellular community - eukaryotes    04510 Focal adhesion     122129485   09142 Cell motility    04820 Cytoskeleton in muscle cells     122129485  09180 Brite Hierarchies   09183 Protein families: signaling and cellular processes    04147 Exosome [BR:char04147]     122129485    00536 Glycosaminoglycan binding proteins [BR:char00536]     122129485 Exosome [BR:char04147]  Exosomal proteins   Exosomal proteins of other body fluids (saliva and urine)    122129485 Glycosaminoglycan binding proteins [BR:char00536]  Heparan sulfate / Heparin   Extracellular matrix molecules    122129485  Hyaluronan   Extracellular matrix or blood plasma proteins    122129485 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  VWA Collagen VWA_2 Motif Other DBs NCBI-GeneID:  122129485 NCBI-ProteinID:  XP_042560336 UniProt:  A0A8M1K8H4 LinkDB All DBs Position Unknown AA seq 800 aa AA seqDB search MAVLIWVVFLLGILQTSAQDPEYDLIRDQDSCPVGVYFALDTSESVALRDYPWGSLVEKL KIFVTMFSRRLEASAIKSEGVQWTYGGLHFSDHVEVFSPVTSDVTSFLRETAKVRYIGRG TFIDCALRNVTEQVRRSPGGKPRLQYAVVLTDGHSTGRPCGGVQQAAEAARAAGIRLFVV ATDVETSEGDLKQIASSPAELYRKDYMVFPDDRRQAAIDRIVDTIVRDADFEGAKGSTGG IGDPGAAGPTGDAGIEGPIGLPGPKGRSGSPGYNGIDGEKGKRGTIGTAGCKGDSGMPGD PGPAGDFGFTGESGEPGEKVVFLGKVADQVRRVLGGLKGRRLSLDQQDRQGEDGPEGERG PTGERGLSGVTGPPGFPGIRGEVGEVGRGGPQGTPGELGDFGIRGDNGDPGPTGDRGESG LPGLQVHHPSLSVCWSLGSRLGVVQYSHQGALQAIRLDDHGITSVSSFKAKVKAMEWIAG GTWTPSALKFTYEQLIVPGRRKGTKVVAIVITDGRYDPKDLDNLGGLCSGVEVYGIAIGD MFDTDAEKQALTRIACNVRERVKTLSVYAELTAEEFLEEIELILCPEPENICPDLKCASD LSVAPLTQRPVDLLFFVDGSERMGPENFVSVLRFIELLSHEIPLSTREGDYKGARFAVMQ FGGEQDPDVLLDFTAKRRSFTNLVSRAVYRDTSSTLGSAIQFAANNLVNPGGRYRGVRPD AELSFVFITDGVTSDVGFAEGLAAMRKTNAVAMAIAAGSDTDHERLLQLVFRDKSLVLNL KSYKDLSHPRVIKHIARCLG NT seq 2403 nt NT seq  +upstreamnt  +downstreamnt atggctgttttgatctgggtcgtctttctgttgggtatacttcagacatcagcccaagac cctgagtatgacctaataagggatcaggactcgtgcccggtgggagtgtactttgcgctg gacacctctgagagcgtggcgctgcgggactacccgtggggcagcctggtggagaaacta aagatcttcgttacaatgttttcgagacgcctggaggcctcagcgattaaatccgagggg gttcagtggacctatggaggtcttcacttctccgaccacgtggaggtatttagcccggtg acctccgatgtgacctcgttcctacgcgagaccgccaaggtgcgctacattggccgaggc accttcattgactgcgccctgaggaatgtgacggagcaggtgaggaggtcaccgggcggg aagccgcgtctacagtacgctgtggtgttaacggacggacacagcacgggcagaccctgc ggaggggtccagcaagccgccgaagctgccagagcagcgggcatccggctgttcgtggtg gcaaccgatgtggagacctccgaaggcgatcttaaacagatcgccagctcacccgcagag ctctaccgcaaggattacatggtcttccctgacgatcgacgacaggctgccatcgacagg atcgttgacacaatagtcagagatgctgacttcgagggggcgaagggaagcactggcggc atcggggatcccggagctgcagggccaacgggagatgctggtattgaaggtccgattggt ctgcctggtccaaagggacgatcaggatcccccggctataatggcatcgatggggagaag ggaaagcgtggaaccatcggcacggccggctgtaagggcgactctggtatgccgggtgac cctggacctgctggtgatttcgggttcacgggagaatctggggagcccggtgaaaaggtg gtgttcctgggcaaagtggcagaccaggtccgcagggtcctcgggggactgaaggggaga aggctcagcctggaccagcaggacaggcagggtgaagatggccccgagggtgaacgaggg cccactggagaacgaggcctctcaggggtgacgggtccgcccggttttccgggaattagg ggtgaagtaggggaggtgggcagaggtggtccacagggtacccccggcgagctaggggac tttggcatacgaggagacaatggagatcctggtcctacgggagacagaggagaatctggt ttgccaggacttcaggtacatcatccttctctgtctgtctgctggtccttaggctcccgt ctgggagtagtgcagtatagccaccagggggcgctgcaggcgatccgcctggatgaccat gggatcacctcagtgtcctccttcaaggccaaggtcaaagccatggagtggattgctgga ggaacctggacgccttcggctctcaagttcacctatgagcagctgatcgtgcccgggaga agaaagggcacaaaggtagtcgccatcgtcatcaccgacggccgctatgaccccaaagac ctggacaatctagggggcctgtgcagcggggtggaggtgtacggcatcgccatcggggac atgtttgacacagacgctgagaagcaggctctgacgcggatcgcttgcaacgtgagggag agggtgaagaccctgagcgtgtatgccgagctcacggcggaggaattcctggaggagatc gagctgatcctctgcccagaaccggaaaatatctgcccagacctgaagtgtgcctcagat ttgagtgtggctcctttgacacagcggccggtggacctgctgttcttcgtggacggctcg gagcggatggggcctgagaactttgtcagcgtgcttcgtttcatcgagctactctcgcat gaaatccccctctcaacaagggagggagactacaagggggcacgttttgccgtgatgcag tttggtggggaacaagatccagacgtcctcctggatttcaccgctaagcgcaggtccttc accaaccttgtctcccgtgccgtgtaccgcgacacttcctccactctgggaagtgccatt caattcgcggccaacaatctcgtgaatcctggtggtcggtatcgaggtgtccgcccagat gcagagctgtccttcgttttcattacagatggggtcaccagtgacgtcggctttgctgaa ggcttggcagccatgcgcaagacgaatgctgtggccatggctatagcagcggggtctgac actgaccacgagcggctgctgcagcttgtcttcagagacaaatcgcttgtattgaacttg aagagttacaaagacctctctcaccccagagtcatcaagcatattgctcgctgtttgggt taa

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