Clupea harengus (Atlantic herring): 122129491
Help
Entry
122129491 CDS
T09045
Name
(RefSeq) guanylate-binding protein 1-like
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122129491
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
RHD3_GTPase
MMR_HSR1
URGCP_GTPase
DUF5560
Motif
Other DBs
NCBI-GeneID:
122129491
NCBI-ProteinID:
XP_042560348
UniProt:
A0A8M1KDI4
LinkDB
All DBs
Position
Unknown
AA seq
570 aa
AA seq
DB search
MAPGYMQAPVCLIDNGTDGRMSVQQGALQILEQIQEPVVVVAVVGLYRTGKSYLLNRLAG
KPTGFALGGTIKSKTKGIWMWCVPHPSKKGHTLVLLDTEGLGDVEKGDEKHDTWIFCLAV
LLSSTLVYNSLGIIDNNALEKLQYVMELTEHIKVKSSEHDQTTGLMRVFPSFVWTVRDFT
LELELKGKPITADEYLENALKLKSGSSAEVMRQNQLRQGLRDFFAPRRCFVFDRPANAKN
MRRMEELTDADLDPSFVEEAQKFCSYVFSNSKPKAMRGGLGVTGRMLGSLAETYVEAIRS
GQVPCLESAVESLVMIQNGRAITDALQFYRSEMERWVRLPSETQEALSEIHAAAEKHAVD
IFVRGSFNDHEHKYQLELLGSVLKEYEEWCGRNVEESRRVCRAVLSRVFAPLEEAVTGGA
FMQPGGYKAFQTALDNAIHLYREEKGKGLLREEVLTEYLKDKRAVGENILAADRSLTEAQ
QRMEVWRTTSVFKFLTGGRDSYFDAWLRLLAWGRCGFPNLDDVTLRIPGNSALYQSAVAM
EVVQITAADPAARRLGSVVESYIPSPASHR
NT seq
1711 nt
NT seq
+upstream
nt +downstream
nt
atggcaccagggtacatgcaggccccggtgtgtctgattgataatgggacagacgggcgc
atgagtgtccagcagggggcactacagatcctggagcagatccaggagccggtggtggtg
gtggctgtggtggggctctaccgcacggggaagtcctacctcctgaaccggctggccggg
aaaccaacagggtttgccctgggcggcaccattaagtccaaaaccaaaggaatctggatg
tggtgtgtacctcacccctccaaaaaaggacacactctggtgctgttggacacagaagga
ctgggagacgttgagaagggcgatgagaaacacgacacctggatcttctgtctggccgtt
ctactcagcagcactctggtctacaacagcttgggcatcatcgacaacaacgccctggag
aaactgcagtacgtgatggaactgacggagcacatcaaggtgaagtcgagcgagcatgac
cagaccactgggctgatgcgggtcttcccctccttcgtgtggacggtcagagacttcact
ctggagctggagctgaagggcaaacccatcactgccgatgagtacctggagaacgccctg
aagctgaaatcaggctcctctgctgaggtcatgagacagaaccagctgcgccagggcctg
agggacttcttcgctccgaggcgctgcttcgtgttcgaccgcccggccaacgccaagaac
atgaggcgcatggaggaactcacggacgcagacctggacccctcctttgtggaggaggcc
cagaagttctgcagctacgtcttcagcaactccaagcccaaagccatgaggggaggcctg
ggggtcactggcaggatgctgggcagcctggcagagacgtatgtggaggcgatccgcagc
gggcaggtgccgtgtctggagagcgcagtggagtccctggtgatgatccagaacggccgc
gccatcacagacgctctgcagttctaccggagtgagatggagcgctgggtgcgcttgccc
tccgagacacaggaggcgctgtctgagatccacgctgccgcagagaaacacgccgtcgac
atcttcgtcagaggatcctttaacgaccacgaacacaagtaccagctggagctcctgggg
agtgtgttgaaggagtatgaggagtggtgtgggcgtaacgtggaggagtcgcggcgtgtg
tgccgagccgtcctgtcccgtgtgttcgcccccctggaggaggctgtgacggggggggcc
ttcatgcagccgggggggtataaggccttccaaactgccctggacaacgccattcacctc
tacagagaagagaagggcaaaggactcctgagagaggaggttctgacggagtatctgaag
gataagagagcggttggtgagaacatcctggccgctgatcgctctctcactgaggcccag
cagagaatggaagtttggcgcacgaccagtgtctttaagttcctcacgggtggccgggac
tcttactttgacgcctggttgcgtctgttggcatggggacgatgcggcttccccaacctg
gatgacgtcaccctcaggattcccggaaactcagcgttgtaccagtctgcggtggcaatg
gaagtggtgcagataacagccgcagatcccgcagcccgtcgccttggctctgtcgtggaa
tcctacatcccgtctcccgcatctcaccgct
DBGET
integrated database retrieval system