Clupea harengus (Atlantic herring): 122129552
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Entry
122129552 CDS
T09045
Name
(RefSeq) calpain-2 catalytic subunit-like
KO
K03853
calpain-2 [EC:
3.4.22.53
]
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04141
Protein processing in endoplasmic reticulum
char04210
Apoptosis
char04217
Necroptosis
char04218
Cellular senescence
char04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
char00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
122129552
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
122129552
04217 Necroptosis
122129552
04218 Cellular senescence
122129552
09144 Cellular community - eukaryotes
04510 Focal adhesion
122129552
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
char01002
]
122129552
Enzymes [BR:
char01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.53 calpain-2
122129552
Peptidases and inhibitors [BR:
char01002
]
Cysteine peptidases
Family C2: calpain family
122129552
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C2
Calpain_III
EF-hand_1
EF-hand_6
EF-hand_8
CAPN13-like_C_EFh
EF-hand_7
Motif
Other DBs
NCBI-GeneID:
122129552
NCBI-ProteinID:
XP_042560428
UniProt:
A0A8M1KDR2
LinkDB
All DBs
Position
Unknown
AA seq
703 aa
AA seq
DB search
MTAMAGIASKLQHDREKAQGIGTNSQAVKYLGQDYEALRGNCLESGRLFEDDTFEAEVSS
LGFKDLGRNSSKVRGVTWERPTELSRNPQFILQDATRTDICQGALGDCWLLAAIASLTLN
KKVLSRVVPSDQSFEQGYAGIFHFEFWQFGEWVDVVIDDRLPTRDGELLFVHSANGSEFW
SALLEKAYAKLNGCYEALSGGSTTEGFEDFTGGIAEIHDLKQAGPGLFKIIKKALNRGSL
LGCSIDITSSSDSEAITSQKLVKGHAYSLTGADHVEYRGEMVKLIRVRNPWGQVEWTGAW
SDRSSEWQYVSSEDQSRLKNASEDGEFWMSFSDWMDHYSRVEICNLTPDALDDDEVEKWS
LSKFEGNWRRGSTAGGCRNFPNSFWQNPQFVIKLDEEDDDPDDNEAGCTFIVGLIQKNRR
KMRKMGEDMQTIGFAIYEVPEEYAGRRQVHLNKSFFLRNASKARSETFINLREVCNRFSL
PPGEYLILPSTFEPNKNGDFAIRVFSEKHVDFEELDDPIDCHVEEIHFDEDDIDDRFQNL
FGQLAGHDSEISAFELQRILNKVVTKRSDVKTDGFSLATCRNMINLLDKDGSGKLGLIEF
KILWTKIQKYLDYYKNRDADDSGCMSSAEMRVAVEDAGFSLNNPLHQILVARYSEPNLSI
DFDNFVCCLVRLESLFKTFKTLDKDGSGTVELNLFEWLSVAML
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgacagcaatggcggggattgcatcgaagctccaacacgaccgggagaaggctcaaggc
attggcacgaactcgcaggcagtaaaatacttgggtcaggattacgaagcgctgagagga
aactgccttgaatctggacggctgtttgaggatgatacttttgaggcagaggtgtcttct
cttggatttaaagaccttgggcgaaactcatctaaagtccgtggtgtcacctgggagcga
cctacggaacttagccgcaacccccagtttattcttcaagatgccaccagaacagatatc
tgccagggagctcttggtgactgctggctactggcagccattgcctctttgaccctcaac
aaaaaagtcctctctcgtgtcgttccttctgaccagagttttgagcagggttacgctgga
atcttccattttgagttctggcagtttggggaatgggtggatgtggtgattgacgaccgt
ctgcccaccagagacggagagctgctgtttgttcactcagcgaatggttcagagttctgg
agcgccctgctagagaaggcctatgctaagctgaatgggtgctatgaggccctctctgga
ggatccacaactgaaggctttgaggatttcactggaggtatcgcagagatccatgacctc
aagcaggctggaccaggactcttcaagatcatcaagaaagccctgaacagaggttccctc
ctgggctgttctattgatatcaccagctcatctgactcggaagccatcacgtctcagaag
cttgtgaagggacatgcttactccttaactggagcagatcacgtggagtacagaggtgag
atggtgaaactcatccgcgtgcgaaacccctggggtcaggtggaatggacaggagcgtgg
agcgacagatcttctgaatggcagtatgtcagcagtgaggatcagtccaggttgaagaat
gcctcggaggacggggagttctggatgtctttctctgactggatggaccattactcacgt
gtggagatctgtaacctgactcctgatgctctcgatgatgatgaggtggagaaatggtcc
ctgtccaaatttgaaggaaactggaggaggggctcgactgctggaggctgcaggaacttt
ccaaacagcttttggcagaatcctcagtttgtgatcaaactcgatgaagaggacgacgac
cccgatgacaatgaggctggctgtaccttcatcgtaggtctgattcagaagaaccgcaga
aaaatgaggaaaatgggggaggatatgcaaaccatcggcttcgccatctatgaggtgcct
gaggagtacgcagggaggagacaggttcatctgaataagagcttcttcttgcgcaatgcc
tccaaggcccgctctgagaccttcatcaacctgcgagaggtgtgcaaccgcttcagcctc
cctcccggggagtacctcatcctcccgtccaccttcgagcccaacaagaacggcgacttc
gccatacgggtcttctctgagaagcatgtcgactttgaggagttggatgaccccattgat
tgtcatgtggaggagattcatttcgatgaagatgatattgatgacagatttcaaaacctg
tttggacagctggcaggccatgactctgagatttctgcctttgagttgcaaagaatcctc
aacaaggtggttactaaacgttctgacgttaagactgatgggtttagtcttgcaacctgc
cgtaacatgatcaatcttctggataaagatgggtctggcaaattgggcctcatagaattc
aagatcctgtggacgaaaatccagaagtatctggactactacaagaacagagatgcagac
gattctggttgcatgagttcagctgaaatgagggtggctgttgaagatgcaggattctct
ctcaataaccccttgcatcagatccttgtggctcgctacagtgaacccaatctctccatt
gactttgacaactttgtctgctgcttagtccgtctggagtcattgttcaagacatttaag
actctggataaggatgggtctggaactgtggaactcaatctcttcgagtggctgagtgtg
gccatgctgtaa
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