Clupea harengus (Atlantic herring): 122129905
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Entry
122129905 CDS
T09045
Name
(RefSeq) uncharacterized protein LOC122129905
KO
K20899
guanylate-binding protein 1/3/4/7
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
char00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
122129905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GBP
GBP_C
zf-UBR
RHD3_GTPase
MMR_HSR1
PAS_GdpP
Motif
Other DBs
NCBI-GeneID:
122129905
NCBI-ProteinID:
XP_042560566
UniProt:
A0A8M1K938
LinkDB
All DBs
Position
Unknown
AA seq
1310 aa
AA seq
DB search
MSWQKNTTLCGRVSKTGETIYSCRDCRLDPECVLCKDCFQNSTHRGHDYKTRVSGGGTAC
SCGDVGGWRGAPYCFKHAPDTSDHTGWGEKEDPLHRHSETSLKGGTVAMKAPVCLIDNGT
DGRLRVQQGALKILEQIQQPVVVVAVVGLYRTGKSYLMNRLAGAQTGFALGSTIESKTKG
IWMWCVPHPNKAGHTLVLLDTEGLGDVEKGDEKHDTWIFCLALLLSSTLVYNSLGTIDNI
ALEKLQFVAELTEHIKVKSSGHDRKTELMLVFPSFVWTVRDFSLELELKGKPITADEYLE
NALKLKPVETGSSPEVKKHNKLRQNLRDFFAVRRCFVMERPANSKDMKRMEQLKDSDLES
SFVQQAKAFCSYIHHSAQVKAMRGGRGLNGRMLGNLAETYVEAIRSGKVPCLESAVESLA
SIQNGRAITEALKFYRAEMERKVKFPTETQEALSMIHTAAEKLAISIFINESFNDQDHKH
QQQLVTDMAKEYGELCKKNVKVSRKGCWLVISQAFASLDKALTNGSYMRSGGYEDFRSAL
NRGAQLYRSGKRKGVMSEEVLTEYLEEKNVVGKSIRAADRSLTEAQKKMEEDKVRREEAE
QKQKLLVQRTNLQQQAIRDLERSNEENIRQLEVKMEGERVRAQAELERVVTAKLKALVSV
GGSVCDYGDVGEWRNAPYCSKHVPDTSDHTGWGEQEDPLHRHSETPLKGGIVAMKEPVCL
IDNGTDGRLRVQQRSLQILEQIQQPVVVVAVVGLYRTGKSYLMNRLAGTQTGFALGSTIE
SKTKGIWMWCVPHPNKAGHTLVLLDTEGLGDVEKGDEKHDTWIFCLALLLSSTLVYNSLG
TIDNNALEKLQFVAELTEHIKVKSSEHDRKTELMLVFPSFVWTVRDFTLELELKGKPITA
DEYLENALKLKPVETGSSPEVLKHNKLRQNLRDFFAVRRCFVMERPASGKDMKRMEQLRD
SDLESSFVQQAKAFCSYIHHSAQVKAMRGGRGLNGRMLGNLAETYVEAIRSGKVPCLESA
VESLAAIQNGRAITEALKFYRAEMERKVKFPTETQEALSMIHTAAEKLAISIFINESFND
QDHKYQQQLVTDMAKEYGELCKKNVKVSREVCRSVISQAFASLEKALNNGSYMRSWGYED
FRCELDRGAQLYRSEKRKGVMSEEVLTKYLEEKNVVGKTIRAADRSLTEAQKKMEEDKVR
RKEAEQQQKLLVQRNRLQQQAMWDLERSNEENIRQLEVKMEGERVRAQAELERVVTAKLK
EQRELLECGYKRRAQDMEEDIRKLQTDQKKAQEKKKSPSFWGKVAGFFGF
NT seq
3933 nt
NT seq
+upstream
nt +downstream
nt
atgagttggcagaagaacacaacgctgtgtgggagagtctccaagacaggagagaccatc
tactcatgcagggactgtcgtttggaccccgagtgtgtgctgtgtaaggactgtttccag
aacagcacgcacagaggtcatgactacaagacacgcgtgtcgggaggtggcactgcctgt
agctgtggggatgtggggggttggagaggcgccccctactgtttcaaacacgcccctgac
acctctgatcacactggctggggggagaaggaggaccctctacatagacactccgaaaca
tcacttaaaggaggtactgttgccatgaaggccccggtgtgtctgattgataatgggaca
gacgggcgcttgcgtgtccagcagggggcactgaagatcctggagcagatccagcagccg
gtggtggtggtggctgtagtggggctctaccgcacggggaagtcctacctcatgaaccgg
ctggctggggcacaaacaggctttgctttgggcagcaccatcgagtccaagaccaagggc
atctggatgtggtgtgtgcctcaccctaataaagcaggtcacaccctggtgctgctggac
acagaggggctgggagacgtggagaagggcgatgagaaacacgacacctggatcttctgt
ctggctcttctactcagcagcactctggtctacaacagcttgggcaccattgacaacatc
gccctggagaaactgcagtttgtggctgaactgacggagcacatcaaggtgaagtccagt
gggcatgaccggaagacagagctgatgctggtcttcccctccttcgtgtggacggtcaga
gacttctctctggagctggagctgaagggcaaacccatcactgccgatgagtacctggag
aacgccctgaagctgaaaccagtcgaaacaggctcctcccctgaagttaaaaagcacaat
aagttgcggcagaacctgagggacttctttgctgtgcggcgctgcttcgtgatggaacgt
ccagccaacagcaaagacatgaaacgcatggagcagctgaaggactctgacctggagtcc
agctttgtgcagcaggcaaaagcgttctgcagctacatccaccacagcgcccaggtcaag
gccatgagaggaggccgggggctgaacggcaggatgctgggcaacctggcagagacgtat
gtggaggcgatccgcagtgggaaggtgccgtgtctggagagtgctgtggagtcgctggcg
tcgatccagaacggccgggccatcacagaggctctgaagttctaccgggcggagatggag
cgcaaagtgaagttccccacagagactcaggaggcgctgtctatgattcacactgctgca
gagaaactggccatcagcattttcatcaatgaatcattcaatgaccaggaccacaaacac
cagcagcagcttgtgacagacatggcgaaagagtatggggagttgtgtaagaagaatgta
aaagtgtctcgtaaagggtgctggttagtcatctcccaggcgtttgcctctctggataaa
gccttgaccaacggctcctacatgaggtctgggggctatgaagacttccgctctgcactc
aacagaggagctcaactctacagatcaggaaaacgcaagggagtcatgagtgaggaggtt
ctgacagagtatctggaagagaagaacgtagttgggaagagcatccgtgctgctgaccgc
tctctaactgaagcccaaaagaagatggaagaggacaaggtaaggcgggaggaagcagag
cagaagcagaaacttctggtacagcgtaccaacctccagcagcaagccattcgtgacctg
gagagaagcaatgaggagaacatcaggcagttggaggtgaagatggagggggaaagagtg
agagcccaggcagagctggagcgggttgtaaccgctaaactcaaggcactcgtgtccgta
ggtggcagtgtgtgtgactatggggatgtgggggagtggagaaacgccccctactgttcc
aaacacgtccctgacacctctgatcacactggctggggggagcaggaggaccctctgcat
agacactccgaaacaccactcaaaggaggcattgttgccatgaaggagccggtgtgtctg
attgataatgggacagacgggcgcttacgtgtccagcagaggtcgctacagatcctggag
cagatccagcagccggtggtggtggtggctgtggtggggctctaccgcacggggaagtct
tacctcatgaaccggctggctgggacacaaacaggctttgctttgggcagcaccatcgag
tccaagaccaagggcatctggatgtggtgtgtgcctcaccccaataaagcaggtcacacc
ctggtgctgctggacacagaggggctgggagacgtagagaagggcgatgagaaacacgac
acctggatcttctgtctggctctcctactcagcagcactctggtctacaacagcttgggc
accatcgacaacaatgccctggaaaaactgcagtttgttgctgaactgacggagcacatc
aaggtaaagtccagtgagcatgaccggaagacagaactgatgctggttttcccctccttc
gtgtggacggtcagagactttactctggagctggagctgaagggcaaacccatcactgcc
gatgagtacctggagaacgccctgaagctgaaaccagtcgaaacaggctcctccccggaa
gttcttaagcacaataagttgcggcagaacctgagggacttctttgctgtgcggcgctgc
ttcgtgatggaacgtccagccagcggcaaagacatgaaacgcatggagcagctgagggac
tctgacctggagtccagctttgtgcagcaggcaaaggcgttctgcagctacatccaccac
agcgcccaggtcaaggccatgagaggaggccgggggctgaacggcaggatgctgggcaac
ctggcagagacgtatgtggaggcgatccgcagtgggaaggtgccctgtctggagagcgct
gtggagtcgctggcggcgatccagaacggccgggccatcacagaggctctgaagttctac
cgggcggagatggagcgcaaagtgaagttccccacagagactcaggaggcgctgtctatg
attcacactgctgcagagaaactggccatcagcattttcatcaatgaatcattcaatgac
caggaccacaaataccagcagcagcttgtgacagacatggccaaagagtatggggagttg
tgtaagaagaatgtaaaagtgtctcgtgaggtgtgccggtcagtcatctctcaggcgttt
gcctctctggagaaagctctgaacaacggctcctacatgaggtcttggggctatgaagac
tttcgctgtgaactcgacagaggagctcaactctacagatcagaaaaacgcaagggagtc
atgagtgaggaggtcctgacaaagtatctggaggagaagaacgtagttgggaagaccatc
cgtgctgctgaccgctcgctaactgaagcccaaaagaagatggaagaggacaaggtaagg
cggaaggaagccgagcagcagcagaaacttctggtacagcgtaacaggctccagcagcaa
gccatgtgggacctggagagaagcaatgaggagaatatcaggcagttggaggtgaagatg
gagggggaaagagtgagagcccaggcagagctggagcgggttgtaaccgctaaactcaag
gagcagcgggagctactggagtgtggctataagaggcgtgctcaggacatggaggaggac
atcagaaagctacagacagatcagaagaaagcgcaggagaagaagaagagcccgtccttc
tggggaaaggtggccggtttttttggcttctag
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