KEGG   Clupea harengus (Atlantic herring): 122130265
Entry
122130265         CDS       T09045                                 
Symbol
ercc5
Name
(RefSeq) DNA excision repair protein ERCC-5 isoform X1
  KO
K10846  DNA excision repair protein ERCC-5
Organism
char  Clupea harengus (Atlantic herring)
Pathway
char03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:char00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    122130265 (ercc5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:char03400]
    122130265 (ercc5)
DNA repair and recombination proteins [BR:char03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     122130265 (ercc5)
SSDB
Motif
Pfam: XPG_N XPG_I 5_3_exonuc
Other DBs
NCBI-GeneID: 122130265
NCBI-ProteinID: XP_042560868
UniProt: A0A8M1KG98
LinkDB
Position
Unknown
AA seq 1337 aa
MGVHGLWKLLESTGKPINPETLEGRILAVDISIWLNQALKGVRDRDGNTIQNAHLLTLFH
RLCKLLFFRIRPVFVFDGEAPLLKRQTLAIRRQRKDEMSQESKKTKEKMLTTFLKRHALK
VALGDTSQEAVPSLPTVRRDEADDMFVLPALPAPLQRESRPVSPDEEEAPEWEEAAHPYN
SWQEDMYEDPGAVDINSEQFSQLPPEMKHEILKEMKEFSKRRRTMYHTPPEKAGDFSQYQ
LAGLLQRRRLNQRLKGVEQEMSQQSSAGLELPQDSEHSVETRRLVSEDSSHYILIKGPQK
STTVPESQAADTSSGPLTNHGKSKGQPESLWPQITVESPEENRPSSSKPSLPGRGRPSDC
QPPSPRTLQAIQAAMVDSSSEEDDPERRDAPGSPWGDMSPRTLLAVQTAMQEEDMVLTQP
QKGQEVCRKLPEMGPCTSKELQHLNTAPALEQSNLFTDIHESFSACGGTVSSSEEEQDGG
AGDTHVRSQKQLSKNVHIQEQEGGASLRALGAIQRGTNLAEEQRSCTEEEDVVECVGVHN
KADLQGDGESVEKVMSTNTLAINTPSDTKGRTITLSDDESSEPQSTAQSPQPVSGLSERH
DVISTIQTTSEDNPEKLRFPRNVPQGNGHGMKLGEKKGTQSPDGQEKSESESESESGESS
TEENFIEVSEGEEEGAEPHPGESLLKRDAASSPVKRPEASSPVKPEDLIQKEKMDEAMME
VPEGQSRTSQNGEEKDVKGLSPPPPTNDWEHIDLAELRQLESSLEVEQNSLRGQQQQQER
GAATVTGQMCQESQELLRLFGIPFLVAPMEAEAQCAALDRAELTHGTITDDSDIWLFGGR
HVFKNFFSQNKYVEHYQLMDLKNQLGLDRFKLINLAYLLGSDYTEGIPGVGYVTGMEILN
EFPGPTTEPLIQFSNWWSEAQENKKLVANPKDSKVKRKLRALKLQTGFPNPAVAQAYLQP
AVDPSEASFSWGRPHLDLLKEFCHNRFGWSRKKTDEALQPVLKQLSSQQTQLRIDSFFRM
EQQESQQIQSQRLRRAVTCMKRKEREEEQEEEEEDEDMKGTKKGRPGRSEQNREPMSCSV
AFEGGFMGSEGTGANSGRLEEPVGMDCKSTAPTPKVKTQESVQKNCPQKAVLIDSSSSDS
VRKDFKSTAPTPEKKVKTQESIQKNCPQKAVLIDSSSSDSVRKDCKSTAPTPEKKVKTQE
SVQKNCPQKAVLIDSSSSDSVGKDCKSTVPTPEKKVKTQESVQKNCPQKAVLIDSSSSDS
VGKDCKSTAPTPEKKVKTQESIQKHCPQKAVLIDSSSSDSDSESGWAVPMVTAQSVFNNK
PQRKGRRGGRGKGRSGL
NT seq 4014 nt   +upstreamnt  +downstreamnt
atgggagtacacgggctttggaagttgcttgagagcaccgggaagccaatcaaccccgag
acactggaggggaggattctggctgtcgacatcagcatctggctaaaccaggcattgaag
ggtgtaagagatcgtgatggcaacacaatacagaatgcacatcttctcactctgtttcac
cgcctttgcaaacttctcttcttccgcatcagacccgtatttgtgtttgatggagaggca
cctctgctcaagaggcagactctggccatcaggagacagcggaaagatgaaatgagtcag
gagtctaagaaaaccaaagagaaaatgctgacgacctttctcaagagacatgcccttaaa
gtggccctgggagacacaagccaggaagctgtgcccagtcttcccacggtgaggagggat
gaagcggacgacatgttcgtcctcccagcgctacctgcaccgctgcagagggagagcagg
cccgtcagccctgatgaagaagaggcccccgagtgggaggaagcagcgcacccctacaac
agctggcaggaggacatgtatgaagaccccggtgccgtggacataaactcggagcagttc
tcccagttacccccagagatgaagcatgagattctcaaagagatgaaggagttcagcaag
agacggcgcaccatgtaccacactccaccagagaaagcaggtgacttctcccagtaccag
ctggcagggctgctgcagagaagacgtttgaaccagcgtctcaagggtgtggagcaggaa
atgagtcaacagtcctctgcaggtcttgagctcccacaagactcagagcacagtgtggag
acacggcgcctcgtttcagaagactcctctcactatatcctcatcaaggggccccagaaa
agcaccacggttcctgagagccaagcagctgacacatcctctggcccactgactaatcat
gggaagtcaaaaggtcaacctgaatccctctggccccagataacagtggagagtcctgag
gagaaccgtccctcctcttctaaaccctcactgcctggcaggggccggccatcagactgc
cagcccccttcaccgcgcaccctccaggccatccaggctgctatggtggacagcagttca
gaggaggatgatccagagagaagagatgctcctggaagtccctggggtgacatgtctcct
cgtacactgttagctgtacagactgccatgcaagaggaagacatggttctcacacagccc
cagaaagggcaggaagtctgcaggaagcttcccgagatgggcccttgtacctccaaggaa
cttcaacacttaaacacagcgcctgcccttgagcaaagcaatctcttcacagacatacat
gagagtttttcagcatgtggtggcactgttagcagttcagaagaggagcaggatggtgga
gccggtgacacacatgtgcgttctcagaagcagctgagcaagaatgtgcatattcaggag
caggaggggggtgcttctctgagagcattgggtgccatccagagaggtacgaatctggca
gaggagcagagaagctgcacagaggaagaggacgtggtagagtgtgtgggtgtgcacaac
aaggcagacctgcagggagatggagagtcagttgagaaggtgatgagtacgaatacgcta
gccatcaacaccccttcagataccaaaggtagaaccatcacattgtcagatgatgaatct
agtgaaccgcagtcaaccgctcaatcaccccagcctgtcagtggcttgtctgaaagacat
gacgtgatctccacaatacaaactacctctgaggacaaccctgagaagctgaggtttcct
aggaatgtccctcaagggaatggacacgggatgaagctgggggagaagaagggaacacag
tccccagatggtcaagagaagagtgagagtgagagtgagagtgagagtggagagagcagc
acagaggagaactttattgaagtgtcggagggggaggaggagggcgcggagccacaccct
ggtgagtctctactcaagcgagacgctgcatcgtcccctgtgaagcgccctgaggcctcg
tcccctgtgaagcctgaggacctgatccagaaggagaagatggatgaagcaatgatggaa
gttccagagggccaatcgagaacttctcagaatggagaggagaaagatgtgaaaggactg
agtccaccacctccaactaatgactgggaacatatagacctggcggagctgaggcagttg
gagagttccctggaggtggagcagaacagcctgagagggcagcagcaacaacaagagaga
ggagctgccactgtcactgggcagatgtgccaggagagccaggaactcttgcgcctcttt
ggtatccccttcttggtggcccctatggaagctgaggcccagtgtgctgctctggaccgg
gctgaactcacccatggcactattacagacgacagtgatatttggctctttggtggccgc
cacgtcttcaaaaacttcttcagccagaacaagtatgtggaacactaccaacttatggac
ctcaagaaccagcttggccttgaccggtttaagctgataaacctggcttacctgctgggc
agtgactatacagaaggcatacctggggtgggatacgtcacaggaatggagatcctgaat
gagttcccaggccctacaacagagccactcatccaattcagtaactggtggtcagaagct
caggagaataagaaactggtggctaaccctaaggactctaaggtgaagcgtaagctgaga
gccctgaagcttcagacaggatttccaaacccagccgttgctcaggcgtaccttcagcca
gctgtggacccctcagaggcctccttcagctggggccggccacatctggatctcctcaag
gagttttgtcacaatcgttttggttggagccgtaagaagactgacgaggctttgcagcct
gttctgaaacagctgtcttcacaacaaacgcagctgcgcattgactccttcttccgcatg
gagcagcaggagagccagcagatccagagccagcgcctccgtagagctgtcacctgcatg
aagaggaaggagcgtgaggaggaacaggaggaagaggaggaggatgaggatatgaaaggc
acaaaaaagggaaggcctggcaggtcagagcagaatagggaaccaatgagctgctctgtg
gcgtttgaaggaggctttatggggtcagaaggaacaggtgctaattcaggaagacttgag
gagccagtggggatggactgtaaaagtactgcaccaactccgaaagtgaagactcaagag
tccgtacagaaaaactgtcctcagaaggcagtcttaatcgatagcagcagctctgactca
gtgaggaaggactttaaaagtactgcaccaactccggaaaagaaagtgaagactcaagag
tccatacagaaaaactgtcctcagaaggcagtcttaatcgatagcagcagctctgactca
gtgaggaaggactgtaaaagtactgcaccaactccggaaaagaaagtgaagactcaagag
tccgtacagaaaaactgtcctcagaaggcagtcttaatcgatagcagcagctctgactca
gtggggaaggactgtaaaagtactgtaccaactccggaaaagaaagtgaagactcaagag
tccgtacagaaaaactgtcctcagaaggcagtcttaatcgatagcagcagctctgactca
gtggggaaggactgtaaaagtactgcaccaactccggaaaagaaagtgaagactcaagag
tccatacagaaacactgtcctcagaaggcagtcttaatcgatagcagcagctctgactca
gatagtgaaagtggttgggctgttcctatggttactgcacagtctgtcttcaataacaaa
ccacaaaggaagggaagaagagggggtcgtggaaaaggcaggagtggactctga

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