Clupea harengus (Atlantic herring): 122130293
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Entry
122130293 CDS
T09045
Symbol
ssx2ipa
Name
(RefSeq) synovial sarcoma, X breakpoint 2 interacting protein a isoform X1
KO
K06085
synovial sarcoma, X breakpoint 2 interacting protein
Organism
char
Clupea harengus (Atlantic herring)
Pathway
char04517
IgSF CAM signaling
char04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
char00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
122130293 (ssx2ipa)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
122130293 (ssx2ipa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
char03036
]
122130293 (ssx2ipa)
Chromosome and associated proteins [BR:
char03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
122130293 (ssx2ipa)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ADIP
Ribosomal_L30_N
Glyco_hydro_120_ins
DUF1664
Motif
Other DBs
NCBI-GeneID:
122130293
NCBI-ProteinID:
XP_042560909
UniProt:
A0A8M1KGE1
LinkDB
All DBs
Position
Unknown
AA seq
476 aa
AA seq
DB search
MVKANARMVRWLLNNVLSNRHQCLREPPVLLTCLSAGATDDQGACTSRCWTDMGDWWTMT
MPEPSYETKEICTVSRLLMSPSRQNSVPTLPSSLLLPKNYTVSAFCTEQNVSQCTSYINQ
DVGSLGLCGLSVELCAGGEGMKAVPALNLMYELLQVNRRSQRALEELETQQLKNTSDLEH
LQHSHARLKDQLEHIRRENSGLHEGERQLQLKIKTLQSCLKSEKEEVQKLQSIISGRATQ
YNHDAKRKERECTKLKERLNQLLVDKRDKKLAIEVSNTIGRSDGKRGLWKTGKAEARHEG
EMYTALLNDYEARQRSLMVENAELKKVLQQMKKDMVSILSPKKSVAKGEVPDDSLEPLCS
DAEEDACESSRESLEQSCEQAREQLTNSIRQQWRRLKNHMERLDCQASLAACQEREGEEL
ISRRVHEEELQRMRLELQQSRDFIQAQQQLWQVRYTPTLHSTHTSTCITQVRTVPF
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggtaaaagccaatgcacgaatggtacgttggttgcttaacaacgttctctccaatagg
caccagtgcctgcgggagcctcctgtcctcttgacgtgtctgtctgctggcgcgacggat
gaccagggagcctgcacgtcccggtgttggactgatatgggagattggtggacgatgaca
atgccagagccatcatacgaaaccaaagagatctgcactgtgtcccgccttctaatgtct
ccctcgaggcagaactcagtccctaccctgccctcttccttgctgctgcctaaaaactac
actgtaagtgccttctgcacggagcagaatgtcagtcagtgcacctcctacatcaatcag
gacgtgggctccctgggcttgtgtggcctgagtgtggagctgtgtgcggggggcgagggc
atgaaggcagtgccggccctcaacctcatgtacgagctgctgcaggtgaaccggcgcagc
cagagggccctggaggagttggagacccagcagctgaagaacaccagcgacctggagcac
ctgcagcacagccacgccagactcaaggatcagttagagcacattaggagagagaactcg
ggattgcatgaaggcgagagacagctgcagctcaaaatcaagaccttgcagagttgtctc
aagtccgaaaaagaggaagtgcagaaattacagagcatcatctcaggccgtgccactcaa
tacaaccacgatgccaagaggaaggagagagaatgcaccaaactaaaggaaagactcaac
cagttactggtggacaagagagacaagaaactagccatcgaggtgtcaaataccattgga
aggtcagatgggaagagaggcctttggaagactggcaaggcagaagctagacatgaaggg
gaaatgtacacggctctgctgaatgattatgaggctcggcagaggtctctgatggtggag
aatgctgagctgaagaaggtgcttcagcagatgaagaaggacatggtgtccattttgagt
ccaaagaagtctgtggccaaaggagaggtcccagatgacagcttagagccactgtgctcg
gacgcggaggaggacgcgtgtgagtcgagcagggagagcctggagcagtcgtgcgaacag
gcccgcgagcagctcaccaacagcatccgccagcagtggaggagactgaagaaccacatg
gagcgcttggactgccaagcgtccctggcggcgtgtcaggagcgggagggcgaggagctc
atctccaggcgggtccacgaggaggagctgcagcgcatgaggctggagctgcagcagtcc
cgagacttcatccaggcccagcagcagctctggcaggtcagatacacaccaacactccac
tccacacacaccagcacatgtatcactcaagtcaggacagtgcccttttag
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