Clupea harengus (Atlantic herring): 122130336
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Entry
122130336 CDS
T09045
Name
(RefSeq) zinc fingers and homeoboxes protein 3-like isoform X1
KO
K24881
zinc fingers and homeoboxes protein 3
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
122130336
Transcription factors [BR:
char03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
122130336
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
Homeobox_KN
zf_C2H2_ZHX
Motif
Other DBs
NCBI-GeneID:
122130336
NCBI-ProteinID:
XP_042560989
UniProt:
A0A8M1KEQ1
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All DBs
Position
Unknown
AA seq
1141 aa
AA seq
DB search
MASKRKSTIPCMIPSKSKHREEIILGCLPELLPTIPEDSILSISGEEEETHAPPKKQGNV
TWKHPATRGAAYSCPPCRFETTDLTPFLDHLDSHHMDFRAQPSFHCQNCGVSASCFEALI
LHNAKTHPGTGLAGSPLSTSLRVSKKGGVTVVEQHLILVPTEDPGDTRIPINRTSAMKMT
KTKEDLRKIVVSHTGEVHRVDSSGDKVVEIRDPTVLAHMQTTALNGSLGRLPLPSAMQIV
SGAGALPSLRSQNRGPIRPSFTTPVNPPNSSLPLNAFPPSDPNNNLPKVMIPLSSIPAYD
AAMDSSSFLKMSFSKFPYPTKAELCYLTVVSDFPEEQIKLWFTAQRLKQGISWSPEEIED
TRRRMFNTVFEAAPEGSQKQQPHYFMHQHRTAAQAAAVGPNSRAPQVPQGVIGRWKPGVI
VTQSNVIPRPPAKPQSVVRTTAHLQPRAATSTIFDAMSRNLSSSGHHSSSSIISSNISHT
SAHRQAVHSHTKLPESEAGGSSLSKDNVSSIAVVCSVNDYHKPTISNSSSLSITSSNGST
SALNSIYSNFVSNNFCIRNTSPTSKATSCNPNANGGIGSQSKSPGHNNENSNASISNSDS
NTSTSPLRTSNTEDSDISNHTSKISSENTDTSPFTSNESGVVDTPPVPLHCPIQPCSSLD
SFLSKAKKSQEQLEALKKSYVHCQFPNQNEVEELMAATGLTMREVRKWFSDGRYHDRTVK
GSQSSLEMHSEDPLPSSAIPSLDLADNSMRNGPTSQPTLSPPPPTLLKQQVPVSATPHKV
PRVPSPDSTAVYYKERDPLQLIALEESFSQDIQPSEAEVDRLRVETKMTRREIHSWFSER
QKREASQKRDEKNKKDEGDWALHSPPTLTKEDGQFKTEVTSQRLTMKELCPMDEEQSESK
GGSPEPKVNPIKINLKMLKVTDPEGKHGLMVVSPEQESDISKMMSSPSSSLLSDRITPDQ
MHLLRKTFASTPWPNNQQLDELVMVTGLHKSEVVRWFSDSRRIHKNGQLPWLDTYQNTLA
EARVWFAEEDRHNITGHTGTQRDDQTNFMGPDLARGLAGSESLEREQACVLEGSQRYLSS
LLKSGDPEGLDDMTRVATPMQDPWAVKGEEHQQPIDSQSFREHQAQDKQSRDSLRRELLK
V
NT seq
3426 nt
NT seq
+upstream
nt +downstream
nt
atggccagcaaaaggaagtccacaatcccttgcatgatcccatccaaaagcaaacacaga
gaggagatcatactgggctgcctacctgaactcctacccacaattcccgaagacagcatt
ctcagcatttctggagaggaggaggaaacacacgcccctcccaaaaagcagggcaatgtc
acctggaagcatcctgccaccagaggggcagcatacagctgcccaccctgtagatttgag
accacagacctgacacctttcctcgaccatctggacagccaccacatggactttcgggca
cagccaagtttccactgccagaattgtggggtttcagcgtcatgcttcgaggccctaatc
ttacacaatgcaaagacacaccctggaactggcttagcagggagccctttgagcacctcc
ctccgagtctcaaagaaaggtggggtaactgttgtggaacagcacttgatcctggtgcct
acagaagaccctggcgacactaggattcccatcaacaggacgtctgccatgaagatgacc
aagaccaaggaggatctcagaaagattgtggtttcccacactggggaggtgcacagggtt
gactcaagcggtgacaaagtcgtggagatcagagaccccactgtgttggcacatatgcag
accacagcacttaatggatccctcgggaggctccctctcccgtctgccatgcaaattgtc
agtggagctggtgcacttcctagcctgagatcgcagaacagaggtcccattcgaccatca
tttaccactccagttaatcctccaaattcgtctctcccactcaatgcctttcctccctcc
gatccgaacaacaacctccccaaggtgatgattcctctgagcagcatccctgcctacgat
gctgccatggactccagcagcttcctgaagatgtccttcagcaagtttccctaccctacc
aaagctgagctctgttacctgactgtggtgtctgattttcctgaggaacaaatcaagctg
tggttcacagctcagcgtctaaagcaaggcatcagctggtccccagaggagattgaggac
acccggagaaggatgttcaacacagttttcgaggcagcacccgaaggttcacagaaacag
cagccccactacttcatgcaccaacacagaacagctgcccaggcagccgctgtggggcca
aactcccgtgctccccaggtaccacaaggtgtcatcggtaggtggaagccaggggtcata
gtcacccagtccaatgtgatcccaaggcctccagcaaagccccagtcagtggttagaaca
acagcacatctacagcccagagctgctaccagtaccatctttgatgctatgagcaggaat
ctttcaagcagtggccatcacagcagcagcagcatcatcagcagtaacatcagtcacaca
tctgctcaccgacaggctgtacattcacacaccaagctgccggagagtgaggctggaggc
agcagcttaagcaaagacaatgttagcagcatagctgtcgtttgtagtgttaatgattat
cacaaaccaacgatcagtaacagctcaagtctaagcatcacttccagcaatggcagcacc
agtgccttgaacagcatttatagcaactttgtcagcaacaacttttgtattcgaaacact
agccccaccagcaaagctacaagctgcaaccctaacgctaatggaggcatcggtagccaa
agcaagagccccggccacaataatgagaacagcaatgccagcatatctaacagtgatagc
aacactagcaccagcccattgagaactagcaatactgaagatagtgatatctcaaaccac
accagcaagatcagctctgagaacacagacacttcccccttcaccagcaatgaaagtgga
gtggtagacacaccaccagttccgttgcactgccctatccaaccttgtagctcccttgac
tcctttcttagtaaagctaagaagtcccaggaacagcttgaagcactgaagaagagctat
gtccactgccagttcccaaaccagaatgaggtagaggaactcatggcggccactggccta
acaatgagagaggttcgcaagtggttcagtgatgggcgttaccatgaccgcactgtgaaa
gggtcacagtcttctctggagatgcattctgaagatccattgccaagttctgccattccc
tctctggacctagcagacaactctatgagaaatggccctaccagccagcccaccttgagc
ccccctccccctacactgctgaagcaacaagttcctgtatcagctactccacataaagtg
ccccgcgtaccttctccagactccactgctgtttactacaaagagcgtgacccactgcag
ctgattgccttagaggagagcttcagtcaggacattcagccgtctgaggctgaggttgac
aggcttcgagttgagactaagatgacccgtcgagagatccacagctggttctctgaaagg
caaaagagggaggctagtcagaagcgagatgagaagaacaagaaagacgagggtgactgg
gccctccactccccccccactttaaccaaggaggatggtcaattcaaaacagaggtcaca
agccagagactgacaatgaaggaactgtgtccaatggacgaggaacaatcagagagcaag
ggcggaagccctgagccaaaagtcaaccccatcaaaattaacctaaagatgctcaaggta
accgatccagagggcaaacacgggctgatggtcgtgtcacctgagcaagaatcggacatt
tctaaaatgatgtcatcaccatcctcctctcttctgtctgacaggataactcctgatcaa
atgcaccttcttcgaaagacctttgccagcaccccgtggccaaacaaccagcagttggac
gagctggtcatggtcacaggactccataagtcagaggtggtgcgctggttcagtgacagt
cgtcgaatccacaagaatggacagctaccatggctcgacacgtaccagaacacattggcg
gaggccagagtatggtttgcagaggaggatagacacaacataacaggtcacacagggact
cagagggatgaccagaccaatttcatggggccggatctggctaggggtttggctggatct
gagagtctcgaacgagagcaagcttgtgtgctggagggttcacagaggtacttgtcctca
ctgctgaagtctggagatcctgaaggcctagatgacatgacaagagtggcgacaccaatg
caggacccatgggcagtcaagggagaagaacaccagcagcctattgacagtcagagtttt
agggagcaccaggcccaagacaaacagtctagggacagtctgaggagggaactgctgaag
gtgtga
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integrated database retrieval system
