Clupea harengus (Atlantic herring): 122130339
Help
Entry
122130339 CDS
T09045
Symbol
tfcp2
Name
(RefSeq) transcription factor CP2 isoform X1
KO
K09275
transcription factor CP2 and related proteins
Organism
char
Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:
char00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
char03000
]
122130339 (tfcp2)
Transcription factors [BR:
char03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
Grainyhead
122130339 (tfcp2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CP2
SAM_3
SAM_1
SAM_2
DUF7687
Motif
Other DBs
NCBI-GeneID:
122130339
NCBI-ProteinID:
XP_042560997
UniProt:
A0A8M1KAT3
LinkDB
All DBs
Position
Unknown
AA seq
528 aa
AA seq
DB search
MAWALKLPLADEVIESGLVQDFDASLSGIGQELGAGAYSMSDVLALPIFKQEESNLPPDN
DNKILPFQYVLCAATSPAVKLHDETLTYLNQGQSYEIRMLDNRKMGELPEITGKMVKSII
RVVFHDRRLQYTEHQQLEGWRWNRPGDRILDLDIPMSVGIVDPRANPTQLNTVEFLWDPS
KRTSVFIQVHCISTEFTMRKHGGEKGVPFRIQIDTFKESSNESGDYTEHLHSASCQVKVF
KPKGADRKQKTDREKMEKRAPQEKEKYQPSYETTILTECSPWPEATYVNNSPSPGFNSSH
NSFTVAEGYEIEDAINGSPNHVPEPPAQIADLPYHLLRRDSESQQSVTPVWNQQNLLPAA
TPQDAQQWLHRNRFSPYCRLFTNFSGADLLKLTREDVIQICGPADGIRLFNALKGRVVRP
RLTVYVCQESQQAREQQQKHENGDGSSSTFFVYHAIYLEELTATELTEKIAQLFSISPRQ
INQIFKQGPTGIHVLVSDEMIQNFQDEMCFVLDTMKAETNDGYHIILK
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atggcttgggccctgaaactgccgctggcggatgaggtgatcgagtcaggtctggtgcag
gacttcgacgcgagtctctctggcattggtcaggaactgggagccggggcttacagcatg
agtgatgtgcttgcccttcccatcttcaaacaggaggaatccaaccttccaccagacaat
gacaataagatcctgcccttccagtatgttttatgcgccgccacctcgcctgctgtcaaa
ctccacgacgagacgctcacctacctcaaccaaggacagtcttacgaaattcgaatgctg
gacaatcggaaaatgggggagctccctgaaattacggggaaaatggtgaagagcatcatc
cgggtggtcttccatgaccggcgtctgcagtacacagagcaccagcagctggaaggctgg
cgctggaaccggcccggcgaccgcatcctcgacctggacatcccaatgtcagtgggcata
gtggatccccgggcaaaccccacacagctcaacactgttgagtttctgtgggacccgtcg
aaaaggacttcagtcttcattcaggttcactgcatcagcacagaattcaccatgcgcaag
catgggggcgagaagggcgtgcccttccgcatccagatcgacacgttcaaagagagttca
aacgagagcggagactacactgagcacctgcactcggccagctgccaggtcaaagttttt
aagcccaaaggggcagacaggaagcagaagacagacagggagaagatggagaagagagct
ccacaggagaaagagaagtaccagccctcttacgaaaccaccattcttacagagtgttct
ccgtggccggaggccacttatgtaaacaactctccttcaccgggattcaacagctcccac
aacagcttcacagtagccgaagggtatgagatagaagatgctataaatggatcaccgaat
cacgtgccagagccaccagcacagattgcagatttgccataccatctacttagaagagac
agtgagagccagcagtctgtaactcctgtctggaaccagcagaatctattgcccgcggca
acgccgcaggatgcccagcagtggctccatcgaaaccgcttctcgccctactgtcgtctg
ttcacaaacttctcaggagcagacctgctgaaattgacgagggaagacgtcattcaaatc
tgcggccctgccgatggcattcgactcttcaatgcactgaaaggacgggtggtacgtcca
agactgaccgtgtacgtgtgccaggaatcccagcaggcccgggaacagcagcagaagcac
gagaatggagacggcagcagtagcaccttctttgtgtaccacgccatttacctggaagag
ctcactgccactgagctcactgagaagatcgcccagctcttcagcatctctcctaggcag
atcaatcagatcttcaaacaaggacccactggtatccatgtgctggtcagtgatgagatg
attcagaacttccaggatgagatgtgttttgttctggacacaatgaaagccgagacaaac
gatgggtaccacatcatcctaaagtga
DBGET
integrated database retrieval system
