KEGG   Clupea harengus (Atlantic herring): 122130368
Entry
122130368         CDS       T09045                                 
Symbol
dcaf11
Name
(RefSeq) DDB1- and CUL4-associated factor 11
  KO
K11801  DDB1- and CUL4-associated factor 11
Organism
char  Clupea harengus (Atlantic herring)
Brite
KEGG Orthology (KO) [BR:char00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:char04121]
    122130368 (dcaf11)
Ubiquitin system [BR:char04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     122130368 (dcaf11)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WDR55 WD40_WDHD1_1st Beta-prop_EML_2 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_TEP1_2nd Beta-prop_EML ANAPC4_WD40 Beta-prop_TEP1_C Beta-prop_CAF1B_HIR1 Beta-prop_HPS5 Beta-prop_WDR90_POC16_2nd Beta-prop_RIG_2nd Beta-prop_WDR75_1st Beta-prop_SCAP Beta-prop_EIPR1 WD40_MABP1-WDR62_1st Beta-prop_SPT8 Beta-prop_IFT122_1st WDR90_beta-prop_4th Beta-prop_IFT140_1st Beta-prop_LRRK2 Beta-prop_WDR19_1st Beta-prop_RIG_1st PROPPIN
Other DBs
NCBI-GeneID: 122130368
NCBI-ProteinID: XP_042561037
UniProt: A0A8M1KAX0
LinkDB
Position
Unknown
AA seq 545 aa
MGSQSSSGMSGRGSSGNPDQSEPDSNQNSNQRGGRPTERQTERQTERQTERQSAAEEDVD
LAQVLAYLLRRGQVRLVHGSGATGLQLVQSYSDSDEDSDGAWEGRLGDRYNPPVDSQPDT
QDVDRSEIRTQILLATASSGLKSRHSFTHMLTQREQGRCRGSSFSHGECSRIRSHFLPNH
VAFKDTYQQKAFCGVYSNDGNMFLSACQDQNIRLYDTSRGRFSLKRTVKARDVGWSVLDV
CFTPDSRSVLYSSWSDYIHVCSVDGDSESHTALDLNPDERRFCVFSLTASCDGKEILGGA
NDGCLYVFDREQNKRTLKIDAHEDDVNTVAFADSSSQLLFSGSDDALCKVWDRRTLREDR
PQPVGHLAGHRDGITFIHSKGDARYLITNSKDQSIKLWDVRKFSPKEGLAASRLAVTQQN
WDYRWQQVPQKALKRHKLTGDTSVMTYRGHGVLHTLIRCRFSPEFSTGQKFIYTGCSTGK
IIIYDVLTGTIVSRLSGHDACVRDVSWHPYQESIVSSSWDGAVRQWEHRQTHPLDEERER
ERDKE
NT seq 1638 nt   +upstreamnt  +downstreamnt
atgggctcgcagtccagttctgggatgtccggtcggggttctagcggaaacccagaccag
tctgaaccagattccaaccagaactcgaaccagaggggtggcagaccaaccgagagacag
acagaaagacagacagaaagacagacagaaagacagtcagccgctgaggaggacgtcgac
ctagctcaagtgctggcttacttactgagaaggggccaggtccgactggtccatggaagt
ggagccacaggcctacagcttgtccagtcctattcagactcggacgaggacagtgacggg
gcctgggaaggtcgtctcggagaccgctacaatccccccgtggactcccagcctgacacc
caggatgtggatcggagcgagattcgcactcagatcctgctggccacagcctcgtccggc
cttaaaagcagacacagcttcactcacatgctaacacagagggaacagggtcggtgtcga
ggctccagtttctctcacggggagtgcagtcgcattcgatcacatttcctgccaaaccat
gttgcattcaaggacacgtatcaacagaaagccttctgtggtgtttacagcaatgatgga
aacatgttcctctccgcttgtcaagatcagaacatccggctgtatgacaccagcaggggg
cgcttttccctgaagcggacagtgaaagcgcgggacgtgggctggagcgtgctggacgtc
tgcttcacccccgattcccgcagcgtgctctactccagctggtctgactacatccacgtg
tgcagtgtagatggcgacagcgaatcccacaccgccctggacctcaatccagacgaaagg
aggttctgtgtgttttcgctcactgcatcctgtgatgggaaggagattttaggaggggca
aatgatggctgcctgtatgtttttgaccgtgaacagaacaaacggacactgaagatcgac
gcgcatgaggacgacgtgaacacagtggcgttcgccgacagctcgtcgcagctgctgttc
tcagggagcgacgacgcgctctgtaaggtgtgggaccgccgcacgctgcgcgaggaccgc
ccccagcctgtgggccacctggccggccaccgcgacggcatcaccttcatccacagcaag
ggagacgcacgctacctgatcactaactctaaggaccagtccatcaagctatgggatgtg
aggaagttctcccccaaggagggtctggccgcctctcggctggccgtcacacagcagaac
tgggactaccgctggcagcaggttccccaaaaagccctgaagaggcacaagctgacgggc
gacacgtcggtgatgacgtaccggggtcacggcgtgctgcacacacttatccgctgcagg
ttctcaccagagttcagcaccggacagaagttcatctacaccggctgctccaccggcaag
atcatcatctatgatgtcctgacgggcaccatcgtgtccagactctcaggccatgacgca
tgtgtgagagatgtcagctggcacccgtaccaagagagcatcgtcagcagctcatgggac
ggagcggtgcggcaatgggaacacagacagacacaccctctggatgaggagagagaaagg
gagcgggacaaagagtga

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